FFCP PHASE1:Hg19::chr1:67632131..67632151,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149233 | |EntrezGene=149233 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19100 | |HGNC=19100 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEM1,E9PG12,E9PHX4,F5H524,F5H3P0,F5H813,Q5VWK5 | |UniProt=E9PEM1,E9PG12,E9PHX4,F5H524,F5H3P0,F5H813,Q5VWK5 | ||
|association_with_transcript=-17bp_to_ENST00000371002,ENST00000416525,ENST00000431791,ENST00000441823,ENST00000540775,ENST00000540911,ENST00000543799,NM_144701,uc001ddo.2_5end | |association_with_transcript=-17bp_to_ENST00000371002,ENST00000416525,ENST00000431791,ENST00000441823,ENST00000540775,ENST00000540911,ENST00000543799,NM_144701,uc001ddo.2_5end | ||
|cluster_id=chr1:67632131..67632151,+ | |||
|description=CAGE_peak_1_at_IL23R_5end | |description=CAGE_peak_1_at_IL23R_5end | ||
|id=chr1:67632131..67632151,+ | |id=chr1:67632131..67632151,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.21e-26!140;CL:0000084!1.49e-25!25;CL:0000827!1.49e-25!25;CL:0000838!3.63e-24!52;CL:0000542!1.52e-23!53;CL:0000051!1.52e-23!53;CL:0000791!1.24e-22!18;CL:0000789!1.24e-22!18;CL:0002420!1.24e-22!18;CL:0002419!1.24e-22!18;CL:0000790!1.24e-22!18;CL:0000988!1.87e-19!182;CL:0000037!3.41e-18!172;CL:0000566!3.41e-18!172;CL:0000625!1.19e-17!11;CL:0002031!1.59e-17!124;CL:0002087!9.39e-17!119;CL:0002032!1.33e-16!165;CL:0000837!1.33e-16!165;CL:0000990!1.99e-16!8;CL:0000451!4.94e-16!10;CL:0000453!5.48e-11!5;CL:0000840!2.11e-10!5;CL:0001029!2.11e-10!5;CL:0000080!6.94e-09!6;CL:0000624!2.81e-08!6;CL:0000623!1.57e-07!3;CL:0000825!1.57e-07!3 | |ontology_enrichment_celltype=CL:0000738!9.21e-26!140;CL:0000084!1.49e-25!25;CL:0000827!1.49e-25!25;CL:0000838!3.63e-24!52;CL:0000542!1.52e-23!53;CL:0000051!1.52e-23!53;CL:0000791!1.24e-22!18;CL:0000789!1.24e-22!18;CL:0002420!1.24e-22!18;CL:0002419!1.24e-22!18;CL:0000790!1.24e-22!18;CL:0000988!1.87e-19!182;CL:0000037!3.41e-18!172;CL:0000566!3.41e-18!172;CL:0000625!1.19e-17!11;CL:0002031!1.59e-17!124;CL:0002087!9.39e-17!119;CL:0002032!1.33e-16!165;CL:0000837!1.33e-16!165;CL:0000990!1.99e-16!8;CL:0000451!4.94e-16!10;CL:0000453!5.48e-11!5;CL:0000840!2.11e-10!5;CL:0001029!2.11e-10!5;CL:0000080!6.94e-09!6;CL:0000624!2.81e-08!6;CL:0000623!1.57e-07!3;CL:0000825!1.57e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.70e-30;25!CL:0000625;9.32e-27;11!CL:0000791;7.12e-25;18!CL:0000789;7.12e-25;18!CL:0002419;7.12e-25;18!CL:0000542;4.20e-18;53!CL:0000623;1.32e-15;3!CL:0000453;6.80e-10;5!CL:0002087;9.82e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.37e-33,52;CL:0000542,2.26e-32,53;CL:0000051,2.26e-32,53;CL:0000084,4.05e-30,25;CL:0000827,4.05e-30,25;CL:0000625,1.04e-26,11;CL:0000791,8.46e-25,18;CL:0000789,8.46e-25,18;CL:0002420,8.46e-25,18;CL:0002419,8.46e-25,18;CL:0000790,8.46e-25,18;CL:0000738,5.30e-20,136;CL:0000988,3.62e-18,177;CL:0000623,1.46e-15,3;CL:0000825,1.46e-15,3;CL:0002087,3.31e-15,115;CL:0000037,4.64e-15,168;CL:0002032,1.31e-14,161;CL:0000837,1.31e-14,161;CL:0002031,6.27e-13,120;CL:0000453,6.81e-10,5 | |||
|ontology_enrichment_development_v019=CL:0000790;7.12e-25;18!CL:0000051;4.20e-18;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.45e-10!7;UBERON:0000178!1.31e-09!15;UBERON:0000179!1.31e-09!15;UBERON:0000463!1.31e-09!15;UBERON:0002193!1.14e-08!112;UBERON:0002390!1.64e-08!102;UBERON:0003061!1.64e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-07;15!UBERON:0000179;1.17e-07;15!UBERON:0000463;1.17e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.02e-07,15;UBERON:0000179,1.02e-07,15;UBERON:0000463,1.02e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58480434487708,4.51553241974702,4.80135766013443,1.96682138424452,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0.971680998056939,1.03030227053675,0,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.590129310341499,0.786021525498329,1.23360899399706,0,0,0,0,0.111410456885174,0.294605907474837,1.32920336750173,1.89562704635511,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.453237370790265,8.04763036564035,1.37450978193052,3.54227568827304,0.318565414324097,0.651083453856419,0,1.35517607169996,1.4078527226986,1.24930726552346,1.18388626022008,2.46338399076314,13.1044383096076,5.34880391567015,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26044572949058,2.80315847317372,4.10697716095195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.714695326373367,1.64544909234478,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90350890820905,0,0,0,0,0,0,0,18.9524455360774,0,0.398495976502139,4.14425873296722,0,0,7.63125793858631,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,1.48260564340311,3.58335422944858,3.9680340812073,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3275963684876,7.04183653660824,11.7767083864208,0,0,0,6.59958406321269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.848915739187391,1.31135736302374,0,0,0,0,0,0,0,1.12780701575824,0.322289439867886,0.699588091474503,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.322944549180031,0.806971285846153,0,0,0,0.435433495793923,0,2.22261774948139,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58480434487708,4.51553241974702,4.80135766013443,1.96682138424452,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0.971680998056939,1.03030227053675,0,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.590129310341499,0.786021525498329,1.23360899399706,0,0,0,0,0.111410456885174,0.294605907474837,1.32920336750173,1.89562704635511,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.453237370790265,8.04763036564035,1.37450978193052,3.54227568827304,0.318565414324097,0.651083453856419,0,1.35517607169996,1.4078527226986,1.24930726552346,1.18388626022008,2.46338399076314,13.1044383096076,5.34880391567015,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26044572949058,2.80315847317372,4.10697716095195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.714695326373367,1.64544909234478,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90350890820905,0,0,0,0,0,0,0,18.9524455360774,0,0.398495976502139,4.14425873296722,0,0,7.63125793858631,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,1.48260564340311,3.58335422944858,3.9680340812073,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3275963684876,7.04183653660824,11.7767083864208,0,0,0,6.59958406321269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.848915739187391,1.31135736302374,0,0,0,0,0,0,0,1.12780701575824,0.322289439867886,0.699588091474503,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.322944549180031,0.806971285846153,0,0,0,0.435433495793923,0,2.22261774948139,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0.320568492303233 | ||
|short_description=p1@IL23R | |short_description=p1@IL23R | ||
}} | }} |
Latest revision as of 01:43, 19 September 2015
Short description: | p1@IL23R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL23R_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000371002, ENST00000416525, ENST00000431791, ENST00000441823, ENST00000540775, ENST00000540911, ENST00000543799, NM_144701, uc001ddo.2_5end |
EntrezGene: | IL23R |
HGNC: | 19100 |
UniProt: | E9PEM1E9PG12E9PHX4F5H524F5H3P0F5H813Q5VWK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.37e-33 | 52 |
lymphocyte | 2.26e-32 | 53 |
common lymphoid progenitor | 2.26e-32 | 53 |
T cell | 4.05e-30 | 25 |
pro-T cell | 4.05e-30 | 25 |
CD8-positive, alpha-beta T cell | 1.04e-26 | 11 |
mature alpha-beta T cell | 8.46e-25 | 18 |
alpha-beta T cell | 8.46e-25 | 18 |
immature T cell | 8.46e-25 | 18 |
mature T cell | 8.46e-25 | 18 |
immature alpha-beta T cell | 8.46e-25 | 18 |
leukocyte | 5.30e-20 | 136 |
hematopoietic cell | 3.62e-18 | 177 |
natural killer cell | 1.46e-15 | 3 |
pro-NK cell | 1.46e-15 | 3 |
nongranular leukocyte | 3.31e-15 | 115 |
hematopoietic stem cell | 4.64e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.31e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 6.27e-13 | 120 |
Langerhans cell | 6.81e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 1.02e-07 | 15 |
haemolymphatic fluid | 1.02e-07 | 15 |
organism substance | 1.02e-07 | 15 |