FFCP PHASE1:Hg19::chr10:71905940..71905995,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:71905940..71905995,-
|short_description=p2@TYSND1
|description=CAGE_peak_2_at_TYSND1_5end
|association_with_transcript=0bp_to_BC016840_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219743 | |EntrezGene=219743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28531 | |HGNC=28531 | ||
|TSSclassifier=strong | |||
|UniProt=Q2T9J0 | |UniProt=Q2T9J0 | ||
|association_with_transcript=0bp_to_BC016840_5end | |||
|cluster_id=chr10:71905940..71905995,- | |||
|description=CAGE_peak_2_at_TYSND1_5end | |||
|id=chr10:71905940..71905995,- | |||
|ontology_enrichment_celltype=CL:0000066!4.56e-17!254;CL:0002076!3.49e-08!43;CL:0000542!5.34e-08!53;CL:0000051!5.34e-08!53;CL:0000838!8.44e-08!52;CL:0000223!8.49e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.04e-16,253;CL:0002076,2.87e-08,42;CL:0000223,8.17e-08,58;CL:0000542,1.39e-07,53;CL:0000051,1.39e-07,53;CL:0000838,2.26e-07,52;CL:0000791,7.41e-07,18;CL:0000789,7.41e-07,18;CL:0002420,7.41e-07,18;CL:0002419,7.41e-07,18;CL:0000790,7.41e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.73e-14!169;UBERON:0000925!1.73e-14!169;UBERON:0006595!1.73e-14!169;UBERON:0001007!1.91e-11!155;UBERON:0001555!1.91e-11!155;UBERON:0007026!1.91e-11!155;UBERON:0004921!3.29e-11!129;UBERON:0004185!3.29e-11!129;UBERON:0000077!2.01e-09!130;UBERON:0001041!1.20e-08!98;UBERON:0001004!2.10e-08!72 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.72e-11,160;UBERON:0000925,3.72e-11,160;UBERON:0006595,3.72e-11,160;UBERON:0004921,9.72e-09,118;UBERON:0001007,1.69e-08,145;UBERON:0001555,1.69e-08,145;UBERON:0007026,1.69e-08,145;UBERON:0001004,1.73e-07,74 | |||
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| ||
|short_description=p2@TYSND1 | |||
}} | }} |
Latest revision as of 01:36, 19 September 2015
Short description: | p2@TYSND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TYSND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC016840_5end |
EntrezGene: | TYSND1 |
HGNC: | 28531 |
UniProt: | Q2T9J0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.04e-16 | 253 |
endo-epithelial cell | 2.87e-08 | 42 |
endodermal cell | 8.17e-08 | 58 |
lymphocyte | 1.39e-07 | 53 |
common lymphoid progenitor | 1.39e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.26e-07 | 52 |
mature alpha-beta T cell | 7.41e-07 | 18 |
alpha-beta T cell | 7.41e-07 | 18 |
immature T cell | 7.41e-07 | 18 |
mature T cell | 7.41e-07 | 18 |
immature alpha-beta T cell | 7.41e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.72e-11 | 160 |
endoderm | 3.72e-11 | 160 |
presumptive endoderm | 3.72e-11 | 160 |
subdivision of digestive tract | 9.72e-09 | 118 |
digestive system | 1.69e-08 | 145 |
digestive tract | 1.69e-08 | 145 |
primitive gut | 1.69e-08 | 145 |
respiratory system | 1.73e-07 | 74 |