FFCP PHASE1:Hg19::chrX:110507098..110507117,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:110507098..110507117,- to FFCP PHASE1:Hg19::chrX:110507098..110507117,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=827 | |EntrezGene=827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1483 | |HGNC=1483 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWQ6 | |UniProt=F5GWQ6 | ||
|association_with_transcript=0bp_to_ENST00000541758_5end | |||
|cluster_id=chrX:110507098..110507117,- | |||
|coexpression_cluster_id=C533 | |||
|description=CAGE_peak_3_at_CAPN6_5end | |||
|id=chrX:110507098..110507117,- | |||
|ontology_enrichment_celltype=CL:0002541!9.16e-21!3;CL:0002537!2.96e-12!5;CL:0000349!1.46e-09!3;CL:0002577!1.46e-09!3;CL:0000039!1.24e-08!7;CL:0000586!1.24e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.54e-35;19!CL:0002541;3.49e-33;3!CL:0002537;1.69e-19;5!CL:0002577;6.54e-15;3!CL:0000039;6.58e-07;7!CL:0000586;6.58e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.54e-35,19;CL:0002541,3.49e-33,3;CL:0002537,1.69e-19,5;CL:0002577,6.54e-15,3;CL:0000039,6.78e-07,7;CL:0000586,6.78e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.29e-12;1 | |||
|ontology_enrichment_disease=DOID:1799!5.58e-08!1;DOID:10165!5.58e-08!1;DOID:1798!5.58e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;4.29e-12;1!DOID:10165;4.29e-12;1!DOID:1798;4.29e-12;1!DOID:170;5.45e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.06e-12,1;DOID:10165,4.06e-12,1;DOID:1798,4.06e-12,1;DOID:170,5.36e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.15e-36!14;UBERON:0000158!2.15e-36!14;UBERON:0003124!1.99e-33!7;UBERON:0000476!9.16e-21!3;UBERON:0000920!9.16e-21!3;UBERON:0000478!1.28e-20!24;UBERON:0001987!3.14e-15!4;UBERON:0004340!3.14e-15!4;UBERON:0004923!1.26e-09!57;UBERON:0000305!6.90e-09!7;UBERON:0004871!7.87e-08!8;UBERON:0001301!1.48e-07!1;UBERON:0007029!1.80e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.79e-38;10!UBERON:0000158;5.79e-38;10!UBERON:0000478;1.32e-34;24!UBERON:0003124;3.49e-33;3!UBERON:0000920;3.49e-33;3!UBERON:0001987;2.75e-24;4!UBERON:0000305;4.16e-14;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.34e-60,14;UBERON:0000158,5.34e-60,14;UBERON:0003124,2.19e-54,7;UBERON:0000478,1.34e-34,24;UBERON:0000920,3.49e-33,3;UBERON:0001987,2.86e-24,4;UBERON:0004340,2.86e-24,4;UBERON:0000305,4.16e-14,7;UBERON:0004871,2.04e-12,8;UBERON:0004923,7.09e-12,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32177197552485,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.55240396676095,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84951727301724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,14.2543046799667,2.45728561679386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22789466143284,0.0897576444097721,4.56318962072434,15.3120556671321,69.2477806118079,20.2553214887081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43106546199881,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8334280295897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4183318227694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,1.36893320434112,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32177197552485,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.55240396676095,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84951727301724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,14.2543046799667,2.45728561679386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22789466143284,0.0897576444097721,4.56318962072434,15.3120556671321,69.2477806118079,20.2553214887081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43106546199881,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8334280295897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4183318227694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,1.36893320434112,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p3@CAPN6 | |||
}} | }} |
Latest revision as of 01:34, 19 September 2015
Short description: | p3@CAPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPN6_5end |
Coexpression cluster: | C533_chorionic_amniotic_pancreatic_placenta_choriocarcinoma_Placental_mesothelioma |
Association with transcript: | 0bp_to_ENST00000541758_5end |
EntrezGene: | CAPN6 |
HGNC: | 1483 |
UniProt: | F5GWQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.54e-35 | 19 |
chorionic membrane mesenchymal stem cell | 3.49e-33 | 3 |
amnion mesenchymal stem cell | 1.69e-19 | 5 |
placental epithelial cell | 6.54e-15 | 3 |
germ line cell | 6.78e-07 | 7 |
germ cell | 6.78e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.34e-60 | 14 |
membranous layer | 5.34e-60 | 14 |
chorion | 2.19e-54 | 7 |
extraembryonic structure | 1.34e-34 | 24 |
egg chorion | 3.49e-33 | 3 |
placenta | 2.86e-24 | 4 |
allantois | 2.86e-24 | 4 |
amnion | 4.16e-14 | 7 |
somatic layer of lateral plate mesoderm | 2.04e-12 | 8 |
organ component layer | 7.09e-12 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.06e-12 | 1 |
endocrine pancreas cancer | 4.06e-12 | 1 |
pancreatic endocrine carcinoma | 4.06e-12 | 1 |
endocrine gland cancer | 5.36e-08 | 6 |