FFCP PHASE1:Hg19::chr11:63994425..63994440,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84304 | |EntrezGene=84304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28189 | |HGNC=28189 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=301bp_to_CU675261,JF432147_5end | |association_with_transcript=301bp_to_CU675261,JF432147_5end | ||
|cluster_id=chr11:63994425..63994440,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_5_at_NUDT22_5end | |description=CAGE_peak_5_at_NUDT22_5end | ||
|id=chr11:63994425..63994440,+ | |id=chr11:63994425..63994440,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.72e-21!140;CL:0000037!6.50e-20!172;CL:0000566!6.50e-20!172;CL:0000988!3.61e-19!182;CL:0002087!4.18e-18!119;CL:0002032!4.28e-17!165;CL:0000837!4.28e-17!165;CL:0002031!7.44e-16!124;CL:0000766!4.42e-11!76;CL:0000763!7.75e-10!112;CL:0000049!7.75e-10!112;CL:0002194!3.33e-09!63;CL:0000576!3.33e-09!63;CL:0000040!3.33e-09!63;CL:0000559!3.33e-09!63;CL:0000839!4.59e-09!70;CL:0000557!8.03e-09!71;CL:0002057!9.63e-09!42;CL:0002009!1.10e-08!65;CL:0000838!5.26e-08!52;CL:0000860!9.06e-08!45;CL:0000542!9.84e-08!53;CL:0000051!9.84e-08!53 | |ontology_enrichment_celltype=CL:0000738!4.72e-21!140;CL:0000037!6.50e-20!172;CL:0000566!6.50e-20!172;CL:0000988!3.61e-19!182;CL:0002087!4.18e-18!119;CL:0002032!4.28e-17!165;CL:0000837!4.28e-17!165;CL:0002031!7.44e-16!124;CL:0000766!4.42e-11!76;CL:0000763!7.75e-10!112;CL:0000049!7.75e-10!112;CL:0002194!3.33e-09!63;CL:0000576!3.33e-09!63;CL:0000040!3.33e-09!63;CL:0000559!3.33e-09!63;CL:0000839!4.59e-09!70;CL:0000557!8.03e-09!71;CL:0002057!9.63e-09!42;CL:0002009!1.10e-08!65;CL:0000838!5.26e-08!52;CL:0000860!9.06e-08!45;CL:0000542!9.84e-08!53;CL:0000051!9.84e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.39e-55;3!CL:0000451;3.58e-41;10!CL:0000840;1.34e-27;5!CL:0000990;1.17e-18;8!CL:0000771;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.40e-55,3;CL:0000451,3.89e-41,10;CL:0000840,1.47e-27,5;CL:0001029,1.47e-27,5;CL:0000990,1.25e-18,8;CL:0000771,2.99e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.56e-19;1!UBERON:0007297;1.89e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.04e-10!102;UBERON:0003061!3.04e-10!102;UBERON:0002193!8.53e-10!112;UBERON:0002371!1.49e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!3.04e-10!102;UBERON:0003061!3.04e-10!102;UBERON:0002193!8.53e-10!112;UBERON:0002371!1.49e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.50e-25;3!UBERON:0004054;5.50e-25;3!UBERON:0000998;1.56e-19;1!UBERON:0006868;1.56e-19;1!UBERON:0001000;3.25e-19;1!UBERON:0005352;3.25e-19;1!UBERON:0005904;5.15e-19;4!UBERON:0000058;3.50e-08;10!UBERON:0003135;1.62e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.82e-25,3;UBERON:0004054,3.82e-25,3;UBERON:0000998,1.56e-19,1;UBERON:0006868,1.56e-19,1;UBERON:0001000,1.88e-19,1;UBERON:0005352,1.88e-19,1;UBERON:0005904,3.92e-19,4;UBERON:0003135,1.46e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0.852449501065388,0.580418477257168,0.56738522469114,0,0,0,0.434377689410233,0,0,0,0.633765858935825,0.637812899895131,0.209658645508376,0.336985893439485,0.150176892841506,0,0.570025487482497,0,0.365328307529268,0,0,0,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0,0.501559486172034,0.32592226663359,0,0,0.668462741311041,0,0.664601683750863,0.541607727530031,0,0,0.328875809207352,0,0,0,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0,0.637130828648193,0,0,0,0.127986611154418,0,0.473554504088034,0,0.604820229674197,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.39303789839414,0.930705723632056,12.8784937124885,13.7278778587231,15.6012150558417,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0.141775097242386,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.384380134730212,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0,0,0,0.191505370132367,0,0,0,0.456469358066384,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.811367035427949,0,1.4098700508785,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0,0,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0.123563938946503,0.313265848516366,0,0.802577647298789,0,0.182454789215666,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0.79994958341972,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.131545547125698,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0.235676547101626,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.248298857183432,0.112131862580613,0,0.202117188958219,0.217716747896961,0.342233301085281,0.336760265072938,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0.852449501065388,0.580418477257168,0.56738522469114,0,0,0,0.434377689410233,0,0,0,0.633765858935825,0.637812899895131,0.209658645508376,0.336985893439485,0.150176892841506,0,0.570025487482497,0,0.365328307529268,0,0,0,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0,0.501559486172034,0.32592226663359,0,0,0.668462741311041,0,0.664601683750863,0.541607727530031,0,0,0.328875809207352,0,0,0,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0,0.637130828648193,0,0,0,0.127986611154418,0,0.473554504088034,0,0.604820229674197,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.39303789839414,0.930705723632056,12.8784937124885,13.7278778587231,15.6012150558417,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0.141775097242386,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.384380134730212,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0,0,0,0.191505370132367,0,0,0,0.456469358066384,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.811367035427949,0,1.4098700508785,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0,0,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0.123563938946503,0.313265848516366,0,0.802577647298789,0,0.182454789215666,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0.79994958341972,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.131545547125698,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0.235676547101626,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.248298857183432,0.112131862580613,0,0.202117188958219,0.217716747896961,0.342233301085281,0.336760265072938,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p5@NUDT22 | |short_description=p5@NUDT22 | ||
}} | }} |
Latest revision as of 01:31, 19 September 2015
Short description: | p5@NUDT22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NUDT22_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 301bp_to_CU675261, JF432147_5end |
EntrezGene: | NUDT22 |
HGNC: | 28189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.40e-55 | 3 |
dendritic cell | 3.89e-41 | 10 |
immature conventional dendritic cell | 1.47e-27 | 5 |
common dendritic progenitor | 1.47e-27 | 5 |
conventional dendritic cell | 1.25e-18 | 8 |
eosinophil | 2.99e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.82e-25 | 3 |
internal male genitalia | 3.82e-25 | 3 |
seminal vesicle | 1.56e-19 | 1 |
seminal fluid secreting gland | 1.56e-19 | 1 |
vas deferens | 1.88e-19 | 1 |
spermatic cord | 1.88e-19 | 1 |
duct of male reproductive system | 3.92e-19 | 4 |
male reproductive organ | 1.46e-07 | 11 |