FFCP PHASE1:Hg19::chr6:45390269..45390298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=860 | |EntrezGene=860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10472 | |HGNC=10472 | ||
|TSSclassifier=strong | |||
|UniProt=Q13950,F8W8U5 | |UniProt=Q13950,F8W8U5 | ||
|association_with_transcript=355bp_to_ENST00000359524,ENST00000371432,NM_004348,uc003oxt.2_5end | |association_with_transcript=355bp_to_ENST00000359524,ENST00000371432,NM_004348,uc003oxt.2_5end | ||
|cluster_id=chr6:45390269..45390298,+ | |||
|coexpression_cluster_id=C2860 | |||
|description=CAGE_peak_5_at_RUNX2_5end | |description=CAGE_peak_5_at_RUNX2_5end | ||
|id=chr6:45390269..45390298,+ | |id=chr6:45390269..45390298,+ | ||
|ontology_enrichment_celltype=CL:0000988!7.00e-12!182;CL:0000738!7.41e-12!140;CL:0000037!1.23e-11!172;CL:0000566!1.23e-11!172;CL:0000791!1.89e-10!18;CL:0000789!1.89e-10!18;CL:0002420!1.89e-10!18;CL:0002419!1.89e-10!18;CL:0000790!1.89e-10!18;CL:0002320!2.30e-10!365;CL:0000134!3.10e-10!358;CL:0000084!6.33e-10!25;CL:0000827!6.33e-10!25;CL:0002032!7.11e-10!165;CL:0000837!7.11e-10!165;CL:0000219!3.79e-09!390;CL:0002087!8.78e-09!119;CL:0000625!8.03e-08!11;CL:0002031!1.06e-07!124;CL:0000048!2.66e-07!430;CL:0000766!5.38e-07!76 | |ontology_enrichment_celltype=CL:0000988!7.00e-12!182;CL:0000738!7.41e-12!140;CL:0000037!1.23e-11!172;CL:0000566!1.23e-11!172;CL:0000791!1.89e-10!18;CL:0000789!1.89e-10!18;CL:0002420!1.89e-10!18;CL:0002419!1.89e-10!18;CL:0000790!1.89e-10!18;CL:0002320!2.30e-10!365;CL:0000134!3.10e-10!358;CL:0000084!6.33e-10!25;CL:0000827!6.33e-10!25;CL:0002032!7.11e-10!165;CL:0000837!7.11e-10!165;CL:0000219!3.79e-09!390;CL:0002087!8.78e-09!119;CL:0000625!8.03e-08!11;CL:0002031!1.06e-07!124;CL:0000048!2.66e-07!430;CL:0000766!5.38e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.58e-12;25!CL:0000791;3.58e-12;18!CL:0000789;3.58e-12;18!CL:0002419;3.58e-12;18!CL:0000625;1.10e-09;11!CL:0000094;4.97e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-16,177;CL:0000037,9.63e-16,168;CL:0000738,2.35e-15,136;CL:0002032,3.35e-13,161;CL:0000837,3.35e-13,161;CL:0000791,2.83e-12,18;CL:0000789,2.83e-12,18;CL:0002420,2.83e-12,18;CL:0002419,2.83e-12,18;CL:0000790,2.83e-12,18;CL:0000084,4.42e-12,25;CL:0000827,4.42e-12,25;CL:0002087,4.08e-11,115;CL:0002031,2.54e-10,120;CL:0000219,2.93e-10,386;CL:0000134,3.30e-10,354;CL:0000625,1.27e-09,11;CL:0002320,1.93e-09,361;CL:0000766,1.33e-08,72;CL:0000763,3.28e-07,108;CL:0000049,3.28e-07,108;CL:0000838,3.30e-07,52;CL:0000094,4.57e-07,8;CL:0000048,6.22e-07,427;CL:0000542,7.02e-07,53;CL:0000051,7.02e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.58e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.32e-10!375;UBERON:0002390!5.66e-10!102;UBERON:0003061!5.66e-10!102;UBERON:0000178!4.08e-09!15;UBERON:0000179!4.08e-09!15;UBERON:0000463!4.08e-09!15;UBERON:0002193!9.83e-09!112 | |ontology_enrichment_uberon=UBERON:0002384!5.32e-10!375;UBERON:0002390!5.66e-10!102;UBERON:0003061!5.66e-10!102;UBERON:0000178!4.08e-09!15;UBERON:0000179!4.08e-09!15;UBERON:0000463!4.08e-09!15;UBERON:0002193!9.83e-09!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.16e-11;15!UBERON:0000179;2.16e-11;15!UBERON:0000463;2.16e-11;15!UBERON:0002390;8.96e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.67e-12,98;UBERON:0003061,6.67e-12,98;UBERON:0000178,2.77e-11,15;UBERON:0000179,2.77e-11,15;UBERON:0000463,2.77e-11,15;UBERON:0002193,7.49e-11,108;UBERON:0002384,2.11e-09,371 | |||
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| ||
|short_description=p5@RUNX2 | |short_description=p5@RUNX2 | ||
}} | }} |
Latest revision as of 01:26, 19 September 2015
Short description: | p5@RUNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RUNX2_5end |
Coexpression cluster: | C2860_Dendritic_Mast_granulocyte_Neutrophils_gall_anaplastic_pagetoid |
Association with transcript: | 355bp_to_ENST00000359524, ENST00000371432, NM_004348, uc003oxt.2_5end |
EntrezGene: | RUNX2 |
HGNC: | 10472 |
UniProt: | Q13950F8W8U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.80e-16 | 177 |
hematopoietic stem cell | 9.63e-16 | 168 |
leukocyte | 2.35e-15 | 136 |
hematopoietic oligopotent progenitor cell | 3.35e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.35e-13 | 161 |
mature alpha-beta T cell | 2.83e-12 | 18 |
alpha-beta T cell | 2.83e-12 | 18 |
immature T cell | 2.83e-12 | 18 |
mature T cell | 2.83e-12 | 18 |
immature alpha-beta T cell | 2.83e-12 | 18 |
T cell | 4.42e-12 | 25 |
pro-T cell | 4.42e-12 | 25 |
nongranular leukocyte | 4.08e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.54e-10 | 120 |
motile cell | 2.93e-10 | 386 |
mesenchymal cell | 3.30e-10 | 354 |
CD8-positive, alpha-beta T cell | 1.27e-09 | 11 |
connective tissue cell | 1.93e-09 | 361 |
myeloid leukocyte | 1.33e-08 | 72 |
myeloid cell | 3.28e-07 | 108 |
common myeloid progenitor | 3.28e-07 | 108 |
lymphoid lineage restricted progenitor cell | 3.30e-07 | 52 |
granulocyte | 4.57e-07 | 8 |
multi fate stem cell | 6.22e-07 | 427 |
lymphocyte | 7.02e-07 | 53 |
common lymphoid progenitor | 7.02e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.67e-12 | 98 |
blood island | 6.67e-12 | 98 |
blood | 2.77e-11 | 15 |
haemolymphatic fluid | 2.77e-11 | 15 |
organism substance | 2.77e-11 | 15 |
hemolymphoid system | 7.49e-11 | 108 |
connective tissue | 2.11e-09 | 371 |