FFCP PHASE1:Hg19::chr2:97213170..97213185,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:97213170..97213185,+ to FFCP PHASE1:Hg19::chr2:97213170..97213185,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10865 | |EntrezGene=10865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17361 | |HGNC=17361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000497920_5end | |||
|cluster_id=chr2:97213170..97213185,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_5_at_ARID5A_5end | |||
|id=chr2:97213170..97213185,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.81e-32!140;CL:0002057!1.78e-31!42;CL:0000766!3.44e-31!76;CL:0000860!2.11e-28!45;CL:0002087!1.42e-27!119;CL:0002031!7.87e-27!124;CL:0002194!5.53e-26!63;CL:0000576!5.53e-26!63;CL:0000040!5.53e-26!63;CL:0000559!5.53e-26!63;CL:0000839!8.20e-26!70;CL:0000037!3.07e-25!172;CL:0000566!3.07e-25!172;CL:0000557!3.29e-25!71;CL:0002009!1.09e-24!65;CL:0000988!6.21e-24!182;CL:0002032!1.26e-23!165;CL:0000837!1.26e-23!165;CL:0000763!1.65e-19!112;CL:0000049!1.65e-19!112;CL:0000134!1.01e-08!358;CL:0002320!2.25e-08!365;CL:0000219!4.45e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-78;33!CL:0002057;2.55e-78;33!CL:0000473;2.92e-57;39!CL:0000234;2.92e-57;39!CL:0000576;2.77e-35;48!CL:0000766;3.81e-24;69!CL:0000763;2.45e-14;100!CL:0000738;1.01e-09;136!CL:0002087;1.31e-09;104!CL:0000775;9.62e-09;3!CL:0000784;2.36e-08;3!CL:0000094;4.06e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.23e-68,42;CL:0002057,2.23e-68,42;CL:0000473,9.68e-65,48;CL:0000234,9.68e-65,48;CL:0000766,9.87e-53,72;CL:0002194,8.39e-51,59;CL:0000576,8.39e-51,59;CL:0000040,8.39e-51,59;CL:0000559,8.39e-51,59;CL:0002009,5.28e-49,61;CL:0000839,5.64e-45,66;CL:0000557,3.06e-44,67;CL:0000763,1.57e-33,108;CL:0000049,1.57e-33,108;CL:0000738,2.82e-32,136;CL:0002087,4.55e-26,115;CL:0000037,4.52e-25,168;CL:0002031,8.90e-25,120;CL:0000988,1.65e-23,177;CL:0002032,1.47e-22,161;CL:0000837,1.47e-22,161;CL:0000134,9.20e-10,354;CL:0002320,1.87e-09,361;CL:0000775,8.74e-09,3;CL:0000219,2.25e-08,386;CL:0000784,3.19e-08,3;CL:0000034,2.16e-07,441;CL:0000094,3.62e-07,8;CL:0000048,4.76e-07,427;CL:0000723,7.26e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-50;42!CL:0000049;1.03e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.71e-21!102;UBERON:0003061!3.71e-21!102;UBERON:0002371!1.70e-20!80;UBERON:0002193!4.02e-19!112;UBERON:0001474!6.14e-18!86;UBERON:0002405!3.87e-16!115;UBERON:0004765!8.25e-14!101;UBERON:0001434!8.25e-14!101;UBERON:0002384!8.89e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-38,76;UBERON:0001474,2.42e-35,82;UBERON:0004765,8.55e-32,90;UBERON:0002390,1.65e-31,98;UBERON:0003061,1.65e-31,98;UBERON:0002405,1.28e-30,93;UBERON:0001434,3.78e-28,100;UBERON:0002193,3.83e-28,108;UBERON:0002204,6.52e-15,167;UBERON:0003081,1.29e-12,203;UBERON:0002384,4.89e-09,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0.305653622991805,0.164201178899891,0.157421562627358,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0,0.223915474239924,0.32389366601898,0,0.436194716338694,1.51150377475524,0.485168122375632,2.78914844286822,1.6446715520873,0.619412741790207,2.01384674625505,5.63553554364021,5.67557351732605,0.344745680736619,2.5819387343353,1.35426486594342,1.50593871634084,1.09162460023138,2.24723484445085,4.28517449319264,1.92557416245656,1.27867425159808,2.30895910130701,3.19141852194611,1.70489900213078,0.580418477257168,0.56738522469114,1.24564449799115,4.52247597462138,6.77927793946262,6.73285418585862,0.605399502633369,2.20966581592539,2.84816148696796,0,0.212604299965044,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0.800791974072025,0,0,0,0,0.587237189370939,0.382273228125229,0,2.24203425192614,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0.334372990781356,0.32592226663359,0.946895611469467,0,0.779873198196215,0.589211814949674,1.10766947291811,0.541607727530031,0.640456598628376,0,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0.318565414324097,0.651083453856419,0,0,0,0,0.473554504088034,0,0,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0.797747763113191,0.238490624305342,1.14398982156026,1.11437250398869,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.720599767084807,0.50496973370552,0,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,1.49801404789436,5.9832291840805,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58625035258854,0,0,0.245040215981032,0,0,0,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0.274792780205587,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0.494255755786011,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.273810757783986,0,0,0.525774708558629,0,0,0.717873024576814,0,1.28767814440971,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0.395223263795889,0.121792598380896,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.314531883711793,0,0,0,0.123935764259002,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0.205325613712494,0,0.971421986118279,0,0.198950775161368,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0.588925401344836,0,0,0,0.187967835959707,0.0644578879735772,0.299823467774787,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0.665756774185513,0.402547587182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| ||
|short_description=p5@ARID5A | |||
}} | }} |
Latest revision as of 01:20, 19 September 2015
Short description: | p5@ARID5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARID5A_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 43bp_to_ENST00000497920_5end |
EntrezGene: | ARID5A |
HGNC: | 17361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.23e-68 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.23e-68 | 42 |
defensive cell | 9.68e-65 | 48 |
phagocyte | 9.68e-65 | 48 |
myeloid leukocyte | 9.87e-53 | 72 |
monopoietic cell | 8.39e-51 | 59 |
monocyte | 8.39e-51 | 59 |
monoblast | 8.39e-51 | 59 |
promonocyte | 8.39e-51 | 59 |
macrophage dendritic cell progenitor | 5.28e-49 | 61 |
myeloid lineage restricted progenitor cell | 5.64e-45 | 66 |
granulocyte monocyte progenitor cell | 3.06e-44 | 67 |
myeloid cell | 1.57e-33 | 108 |
common myeloid progenitor | 1.57e-33 | 108 |
leukocyte | 2.82e-32 | 136 |
nongranular leukocyte | 4.55e-26 | 115 |
hematopoietic stem cell | 4.52e-25 | 168 |
hematopoietic lineage restricted progenitor cell | 8.90e-25 | 120 |
hematopoietic cell | 1.65e-23 | 177 |
hematopoietic oligopotent progenitor cell | 1.47e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-22 | 161 |
mesenchymal cell | 9.20e-10 | 354 |
connective tissue cell | 1.87e-09 | 361 |
neutrophil | 8.74e-09 | 3 |
motile cell | 2.25e-08 | 386 |
plasmacytoid dendritic cell | 3.19e-08 | 3 |
stem cell | 2.16e-07 | 441 |
granulocyte | 3.62e-07 | 8 |
multi fate stem cell | 4.76e-07 | 427 |
somatic stem cell | 7.26e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-38 | 76 |
bone element | 2.42e-35 | 82 |
skeletal element | 8.55e-32 | 90 |
hematopoietic system | 1.65e-31 | 98 |
blood island | 1.65e-31 | 98 |
immune system | 1.28e-30 | 93 |
skeletal system | 3.78e-28 | 100 |
hemolymphoid system | 3.83e-28 | 108 |
musculoskeletal system | 6.52e-15 | 167 |
lateral plate mesoderm | 1.29e-12 | 203 |
connective tissue | 4.89e-09 | 371 |