FFCP PHASE1:Hg19::chr1:182558343..182558371,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:182558343..182558371,- to FFCP PHASE1:Hg19::chr1:182558343..182558371,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6041 | |EntrezGene=6041 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10050 | |HGNC=10050 | ||
|TSSclassifier=strong | |||
|UniProt=F5H171 | |UniProt=F5H171 | ||
|association_with_transcript=0bp_to_ENST00000543858_5end | |||
|cluster_id=chr1:182558343..182558371,- | |||
|description=CAGE_peak_2_at_RNASEL_5end | |||
|id=chr1:182558343..182558371,- | |||
|ontology_enrichment_celltype=CL:0002031!9.39e-15!124;CL:0002032!1.92e-14!165;CL:0000837!1.92e-14!165;CL:0000037!6.76e-14!172;CL:0000566!6.76e-14!172;CL:0002087!4.14e-13!119;CL:0000738!6.25e-13!140;CL:0000988!1.54e-12!182;CL:0000839!2.13e-11!70;CL:0000557!1.02e-10!71;CL:0000763!2.18e-10!112;CL:0000049!2.18e-10!112;CL:0000766!2.78e-10!76;CL:0002009!9.62e-10!65;CL:0002194!1.15e-09!63;CL:0000576!1.15e-09!63;CL:0000040!1.15e-09!63;CL:0000559!1.15e-09!63;CL:0002057!2.58e-09!42;CL:0000860!1.58e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.35e-10;39!CL:0000234;7.35e-10;39!CL:0000576;1.61e-09;48!CL:0000860;3.64e-09;33!CL:0002057;3.64e-09;33!CL:0000766;5.04e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.93e-21,120;CL:0002032,3.60e-20,161;CL:0000837,3.60e-20,161;CL:0000738,6.47e-19,136;CL:0002087,7.72e-19,115;CL:0000839,9.90e-19,66;CL:0000037,1.10e-18,168;CL:0000766,2.42e-18,72;CL:0000557,4.07e-18,67;CL:0000988,7.07e-17,177;CL:0002194,2.00e-16,59;CL:0000576,2.00e-16,59;CL:0000040,2.00e-16,59;CL:0000559,2.00e-16,59;CL:0002009,2.74e-16,61;CL:0000763,9.86e-16,108;CL:0000049,9.86e-16,108;CL:0000473,1.87e-14,48;CL:0000234,1.87e-14,48;CL:0000860,8.27e-12,42;CL:0002057,8.27e-12,42;CL:0000134,1.14e-08,354;CL:0002320,7.67e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.98e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.47e-13!102;UBERON:0003061!8.47e-13!102;UBERON:0007023!1.51e-10!115;UBERON:0002193!1.03e-09!112;UBERON:0002371!4.17e-09!80;UBERON:0001474!8.68e-08!86;UBERON:0004765!4.60e-07!101;UBERON:0001434!4.60e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.91e-20,98;UBERON:0003061,6.91e-20,98;UBERON:0002193,1.13e-16,108;UBERON:0002371,9.81e-16,76;UBERON:0002405,1.89e-13,93;UBERON:0001474,2.78e-13,82;UBERON:0004765,2.82e-11,90;UBERON:0001434,5.65e-10,100;UBERON:0007023,8.02e-09,114;UBERON:0002384,2.41e-07,371 | |||
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| ||
|short_description=p2@RNASEL | |||
}} | }} |
Latest revision as of 01:17, 19 September 2015
Short description: | p2@RNASEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNASEL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000543858_5end |
EntrezGene: | RNASEL |
HGNC: | 10050 |
UniProt: | F5H171 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.93e-21 | 120 |
hematopoietic oligopotent progenitor cell | 3.60e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.60e-20 | 161 |
leukocyte | 6.47e-19 | 136 |
nongranular leukocyte | 7.72e-19 | 115 |
myeloid lineage restricted progenitor cell | 9.90e-19 | 66 |
hematopoietic stem cell | 1.10e-18 | 168 |
myeloid leukocyte | 2.42e-18 | 72 |
granulocyte monocyte progenitor cell | 4.07e-18 | 67 |
hematopoietic cell | 7.07e-17 | 177 |
monopoietic cell | 2.00e-16 | 59 |
monocyte | 2.00e-16 | 59 |
monoblast | 2.00e-16 | 59 |
promonocyte | 2.00e-16 | 59 |
macrophage dendritic cell progenitor | 2.74e-16 | 61 |
myeloid cell | 9.86e-16 | 108 |
common myeloid progenitor | 9.86e-16 | 108 |
defensive cell | 1.87e-14 | 48 |
phagocyte | 1.87e-14 | 48 |
classical monocyte | 8.27e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.27e-12 | 42 |
mesenchymal cell | 1.14e-08 | 354 |
connective tissue cell | 7.67e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.91e-20 | 98 |
blood island | 6.91e-20 | 98 |
hemolymphoid system | 1.13e-16 | 108 |
bone marrow | 9.81e-16 | 76 |
immune system | 1.89e-13 | 93 |
bone element | 2.78e-13 | 82 |
skeletal element | 2.82e-11 | 90 |
skeletal system | 5.65e-10 | 100 |
adult organism | 8.02e-09 | 114 |
connective tissue | 2.41e-07 | 371 |