FFCP PHASE2:Hg19::chrX:110187748..110187755,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5063 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:8592 |TSSclass...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8592 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B2RCU6,O75914 | ||
|association_with_transcript=235bp_to_ENST00000425146,ENST00000446737,NM_001128166,NM_001128167,uc010npt.1,uc010npu.1_5end | |association_with_transcript=235bp_to_ENST00000425146,ENST00000446737,NM_001128166,NM_001128167,uc010npt.1,uc010npu.1_5end | ||
|cluster_id=chrX:110187748..110187755,+ | |cluster_id=chrX:110187748..110187755,+ | ||
Latest revision as of 01:17, 19 September 2015
| Short description: | p11@PAK3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_PAK3_5end |
| Coexpression cluster: | C1552_parietal_pituitary_small_hippocampus_duodenum_temporal_occipital |
| Association with transcript: | 235bp_to_ENST00000425146, ENST00000446737, NM_001128166, NM_001128167, uc010npt.1, uc010npu.1_5end |
| EntrezGene: | PAK3 |
| HGNC: | 8592 |
| UniProt: | B2RCU6O75914 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@PAK3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 3.30e-36 | 22 |
| cerebral cortex | 5.79e-32 | 25 |
| pallium | 5.79e-32 | 25 |
| cerebral hemisphere | 1.40e-31 | 32 |
| regional part of forebrain | 1.76e-30 | 41 |
| forebrain | 1.76e-30 | 41 |
| anterior neural tube | 1.76e-30 | 41 |
| future forebrain | 1.76e-30 | 41 |
| neocortex | 1.96e-30 | 20 |
| central nervous system | 9.31e-30 | 81 |
Showing 1 to 10 of 49 entries
