FFCP PHASE1:Hg19::chr1:182360458..182360484,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2752 | |EntrezGene=2752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4341 | |HGNC=4341 | ||
|TSSclassifier=strong | |||
|UniProt=P15104 | |UniProt=P15104 | ||
|association_with_transcript=23bp_to_uc001gpa.1_5end | |association_with_transcript=23bp_to_uc001gpa.1_5end | ||
|cluster_id=chr1:182360458..182360484,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_GLUL_5end | |description=CAGE_peak_2_at_GLUL_5end | ||
|id=chr1:182360458..182360484,- | |id=chr1:182360458..182360484,- | ||
|ontology_enrichment_celltype=CL:0002057!4.20e-16!42;CL:0000860!5.98e-14!45;CL:0000766!3.34e-12!76;CL:0000763!3.50e-12!112;CL:0000049!3.50e-12!112;CL:0000839!1.60e-09!70;CL:0000557!3.36e-09!71;CL:0002009!5.71e-08!65;CL:0000037!8.43e-08!172;CL:0000566!8.43e-08!172;CL:0002194!9.22e-08!63;CL:0000576!9.22e-08!63;CL:0000040!9.22e-08!63;CL:0000559!9.22e-08!63;CL:0002032!1.09e-07!165;CL:0000837!1.09e-07!165 | |ontology_enrichment_celltype=CL:0002057!4.20e-16!42;CL:0000860!5.98e-14!45;CL:0000766!3.34e-12!76;CL:0000763!3.50e-12!112;CL:0000049!3.50e-12!112;CL:0000839!1.60e-09!70;CL:0000557!3.36e-09!71;CL:0002009!5.71e-08!65;CL:0000037!8.43e-08!172;CL:0000566!8.43e-08!172;CL:0002194!9.22e-08!63;CL:0000576!9.22e-08!63;CL:0000040!9.22e-08!63;CL:0000559!9.22e-08!63;CL:0002032!1.09e-07!165;CL:0000837!1.09e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.79e-11;33!CL:0002057;7.79e-11;33!CL:0000576;6.61e-10;48!CL:0000766;2.17e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.33e-16,42;CL:0002057,3.33e-16,42;CL:0000766,2.40e-14,72;CL:0000763,7.73e-14,108;CL:0000049,7.73e-14,108;CL:0000473,9.44e-12,48;CL:0000234,9.44e-12,48;CL:0000839,2.04e-11,66;CL:0000557,4.95e-11,67;CL:0002009,1.02e-09,61;CL:0002194,1.64e-09,59;CL:0000576,1.64e-09,59;CL:0000040,1.64e-09,59;CL:0000559,1.64e-09,59;CL:0000037,5.98e-09,168;CL:0002032,7.51e-09,161;CL:0000837,7.51e-09,161;CL:0000988,2.59e-07,177;CL:0000738,4.55e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.95e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.40e-37!115;UBERON:0002390!1.73e-11!102;UBERON:0003061!1.73e-11!102;UBERON:0002193!6.76e-10!112;UBERON:0002371!2.80e-08!80;UBERON:0001049!5.36e-08!57;UBERON:0005068!5.36e-08!57;UBERON:0006241!5.36e-08!57;UBERON:0007135!5.36e-08!57;UBERON:0004765!1.51e-07!101;UBERON:0001434!1.51e-07!101;UBERON:0001474!1.81e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.48e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.10e-37,114;UBERON:0002390,5.45e-13,98;UBERON:0003061,5.45e-13,98;UBERON:0002193,4.11e-11,108;UBERON:0002371,9.28e-10,76;UBERON:0001434,4.63e-09,100;UBERON:0001474,7.51e-09,82;UBERON:0004765,1.41e-08,90;UBERON:0002405,4.94e-08,93;UBERON:0001049,1.25e-07,56;UBERON:0005068,1.25e-07,56;UBERON:0006241,1.25e-07,56;UBERON:0007135,1.25e-07,56;UBERON:0000073,6.55e-07,53;UBERON:0002616,6.55e-07,53 | |||
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| ||
|short_description=p2@GLUL | |short_description=p2@GLUL | ||
}} | }} |
Latest revision as of 01:09, 19 September 2015
Short description: | p2@GLUL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GLUL_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 23bp_to_uc001gpa.1_5end |
EntrezGene: | GLUL |
HGNC: | 4341 |
UniProt: | P15104 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.33e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-16 | 42 |
myeloid leukocyte | 2.40e-14 | 72 |
myeloid cell | 7.73e-14 | 108 |
common myeloid progenitor | 7.73e-14 | 108 |
defensive cell | 9.44e-12 | 48 |
phagocyte | 9.44e-12 | 48 |
myeloid lineage restricted progenitor cell | 2.04e-11 | 66 |
granulocyte monocyte progenitor cell | 4.95e-11 | 67 |
macrophage dendritic cell progenitor | 1.02e-09 | 61 |
monopoietic cell | 1.64e-09 | 59 |
monocyte | 1.64e-09 | 59 |
monoblast | 1.64e-09 | 59 |
promonocyte | 1.64e-09 | 59 |
hematopoietic stem cell | 5.98e-09 | 168 |
hematopoietic oligopotent progenitor cell | 7.51e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.51e-09 | 161 |
hematopoietic cell | 2.59e-07 | 177 |
leukocyte | 4.55e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.10e-37 | 114 |
hematopoietic system | 5.45e-13 | 98 |
blood island | 5.45e-13 | 98 |
hemolymphoid system | 4.11e-11 | 108 |
bone marrow | 9.28e-10 | 76 |
skeletal system | 4.63e-09 | 100 |
bone element | 7.51e-09 | 82 |
skeletal element | 1.41e-08 | 90 |
immune system | 4.94e-08 | 93 |
neural tube | 1.25e-07 | 56 |
neural rod | 1.25e-07 | 56 |
future spinal cord | 1.25e-07 | 56 |
neural keel | 1.25e-07 | 56 |
regional part of nervous system | 6.55e-07 | 53 |
regional part of brain | 6.55e-07 | 53 |