FFCP PHASE1:Hg19::chr12:53301072..53301086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3856 | |EntrezGene=3856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6446 | |HGNC=6446 | ||
|TSSclassifier=strong | |||
|UniProt=F8VQY3 | |UniProt=F8VQY3 | ||
|association_with_transcript=-228bp_to_ENST00000546542_5end | |association_with_transcript=-228bp_to_ENST00000546542_5end | ||
|cluster_id=chr12:53301072..53301086,- | |||
|description=CAGE_peak_12_at_KRT8_5end | |description=CAGE_peak_12_at_KRT8_5end | ||
|id=chr12:53301072..53301086,- | |id=chr12:53301072..53301086,- | ||
|ontology_enrichment_celltype=CL:0000167;9.96e-11;1!CL:0000164;9.96e-11;1!CL:0000502;9.96e-11;1!CL:0000172;9.96e-11;1!CL:0000173;9.96e-11;1!CL:0000082;3.42e-08;19 | |ontology_enrichment_celltype=CL:0000066!4.19e-21!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0000167;9.96e-11;1!CL:0000164;9.96e-11;1!CL:0000502;9.96e-11;1!CL:0000172;9.96e-11;1!CL:0000173;9.96e-11;1!CL:0000082;3.42e-08;19 | ||
|ontology_enrichment_disease=DOID:9119;3.94e-11;1!DOID:4430;9.96e-11;1!DOID:5093;1.58e-10;4!DOID:1612;1.58e-10;4!DOID:1324;2.48e-10;15!DOID:0050615;1.07e-09;16!DOID:299;1.70e-09;25 | |ontology_enrichment_celltype_v019_2=CL:0000167,9.97e-11,1;CL:0000164,9.97e-11,1;CL:0000502,9.97e-11,1;CL:0000172,9.97e-11,1;CL:0000173,9.97e-11,1;CL:0002351,9.97e-11,1;CL:0000082,3.46e-08,19;CL:0000066,5.24e-07,253 | ||
|ontology_enrichment_uberon=UBERON:0004802;3.42e-08;19!UBERON:0000115;3.42e-08;19!UBERON:0002048;4.28e-07;22!UBERON:0004807;4.28e-07;22!UBERON:0000117;4.28e-07;22!UBERON:0000171;4.28e-07;22!UBERON:0000170;4.28e-07;22!UBERON:0005911;9.67e-07;36 | |ontology_enrichment_development_v019=CL:0002351;9.96e-11;1!UBERON:0008425;9.96e-11;1!UBERON:0001041;9.20e-08;30 | ||
|ontology_enrichment_disease=DOID:305!5.21e-37!106;DOID:0050687!5.21e-30!143;DOID:162!5.02e-25!235;DOID:14566!5.27e-24!239;DOID:299!6.43e-13!25;DOID:0050686!4.43e-08!137;DOID:0050615!3.76e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:9119;3.94e-11;1!DOID:4430;9.96e-11;1!DOID:5093;1.58e-10;4!DOID:1612;1.58e-10;4!DOID:1324;2.48e-10;15!DOID:0050615;1.07e-09;16!DOID:299;1.70e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,3.76e-11,1;DOID:0050687,9.50e-11,143;DOID:4430,9.97e-11,1;DOID:5093,1.33e-10,4;DOID:1612,1.33e-10,4;DOID:1324,2.52e-10,15;DOID:0050615,1.08e-09,16;DOID:299,1.72e-09,25;DOID:305,4.26e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004921!9.35e-15!129;UBERON:0004185!9.35e-15!129;UBERON:0004119!2.80e-14!169;UBERON:0000925!2.80e-14!169;UBERON:0006595!2.80e-14!169;UBERON:0000077!4.01e-14!130;UBERON:0001007!9.47e-13!155;UBERON:0001555!9.47e-13!155;UBERON:0007026!9.47e-13!155;UBERON:0001737!5.67e-10!9;UBERON:0001041!8.87e-10!98;UBERON:0000072!1.84e-08!46;UBERON:0005631!2.16e-08!14;UBERON:0000158!2.16e-08!14;UBERON:0008947!6.27e-08!38;UBERON:0003258!6.27e-08!38;UBERON:0001987!3.31e-07!4;UBERON:0004340!3.31e-07!4;UBERON:0001048!7.02e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;3.42e-08;19!UBERON:0000115;3.42e-08;19!UBERON:0002048;4.28e-07;22!UBERON:0004807;4.28e-07;22!UBERON:0000117;4.28e-07;22!UBERON:0000171;4.28e-07;22!UBERON:0000170;4.28e-07;22!UBERON:0005911;9.67e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,8.34e-09,37;UBERON:0004802,3.46e-08,19;UBERON:0000115,3.46e-08,19;UBERON:0002048,4.32e-07,22;UBERON:0000117,4.32e-07,22;UBERON:0000171,4.32e-07,22;UBERON:0000170,4.32e-07,22;UBERON:0005597,4.32e-07,22;UBERON:0000118,4.32e-07,22;UBERON:0005157,7.79e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0,0.220587945464788,0.217879444092406,0.71181185733329,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,1.22988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,2.57545848628462,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,6.65741758041988,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.764628819135115,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953150969619124,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,2.33150377598474,0,0.18714054040822,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0,0.718946809178615,1.07412704805365,0,0.0986434056369336,0,0,0,0,0,0,1.66173999992772,0,0.341380344856499,1.01701460117107,0.472775363535873,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0.922255617552241,3.94933635402997,2.28159481036217,1.27600463892768,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,1.46909527343233,0.706765357169704,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.867798691675654,0,0.0870592065804026,0.17472666824203,0,0.387025325156341,0.65780385377567,0.821154570532092,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,1.15272333723285,0,0,0,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,1.88195521672762,2.81926008926669,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0.694567422971502,0,0,0.617602894321944,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0.577628330751691,0,0,0,0.0752103283492573,0,0,0.785720083444267,0,0.887136517302272,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.443511850813194,0,0.685952037749674,0,0,0.236387681767936,0,0.313972371402056,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.588901401691458,2.19452264968085,0,0,0,0,0.233939463462106,0,0,0.5647304101948,0,1.20770274853339,0,0,0.470317296361523,0,1.41405928260976,0,0,0,0,0,0,0,0.357107877211315,1.76447435857846,0.240724100067505,0,0.458729283404541,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0.506794004045748,0.203977659483963,0,0.551369397209069,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0.269475606319761,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0,0.220587945464788,0.217879444092406,0.71181185733329,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,1.22988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,2.57545848628462,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,6.65741758041988,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.764628819135115,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953150969619124,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,2.33150377598474,0,0.18714054040822,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0,0.718946809178615,1.07412704805365,0,0.0986434056369336,0,0,0,0,0,0,1.66173999992772,0,0.341380344856499,1.01701460117107,0.472775363535873,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0.922255617552241,3.94933635402997,2.28159481036217,1.27600463892768,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,1.46909527343233,0.706765357169704,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.867798691675654,0,0.0870592065804026,0.17472666824203,0,0.387025325156341,0.65780385377567,0.821154570532092,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,1.15272333723285,0,0,0,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,1.88195521672762,2.81926008926669,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0.694567422971502,0,0,0.617602894321944,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0.577628330751691,0,0,0,0.0752103283492573,0,0,0.785720083444267,0,0.887136517302272,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.443511850813194,0,0.685952037749674,0,0,0.236387681767936,0,0.313972371402056,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.588901401691458,2.19452264968085,0,0,0,0,0.233939463462106,0,0,0.5647304101948,0,1.20770274853339,0,0,0.470317296361523,0,1.41405928260976,0,0,0,0,0,0,0,0.357107877211315,1.76447435857846,0.240724100067505,0,0.458729283404541,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0.506794004045748,0.203977659483963,0,0.551369397209069,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p12@KRT8 | |short_description=p12@KRT8 | ||
}} | }} |
Latest revision as of 01:08, 19 September 2015
Short description: | p12@KRT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KRT8_5end |
Coexpression cluster: | NA |
Association with transcript: | -228bp_to_ENST00000546542_5end |
EntrezGene: | KRT8 |
HGNC: | 6446 |
UniProt: | F8VQY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.97e-11 | 1 |
enteroendocrine cell | 9.97e-11 | 1 |
type D enteroendocrine cell | 9.97e-11 | 1 |
somatostatin secreting cell | 9.97e-11 | 1 |
pancreatic D cell | 9.97e-11 | 1 |
progenitor cell of endocrine pancreas | 9.97e-11 | 1 |
epithelial cell of lung | 3.46e-08 | 19 |
epithelial cell | 5.24e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 8.34e-09 | 37 |
respiratory tract epithelium | 3.46e-08 | 19 |
lung epithelium | 3.46e-08 | 19 |
lung | 4.32e-07 | 22 |
respiratory tube | 4.32e-07 | 22 |
respiration organ | 4.32e-07 | 22 |
pair of lungs | 4.32e-07 | 22 |
lung primordium | 4.32e-07 | 22 |
lung bud | 4.32e-07 | 22 |
epithelial fold | 7.79e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 3.76e-11 | 1 |
cell type cancer | 9.50e-11 | 143 |
somatostatinoma | 9.97e-11 | 1 |
thoracic cancer | 1.33e-10 | 4 |
breast cancer | 1.33e-10 | 4 |
lung cancer | 2.52e-10 | 15 |
respiratory system cancer | 1.08e-09 | 16 |
adenocarcinoma | 1.72e-09 | 25 |
carcinoma | 4.26e-09 | 106 |