FFCP PHASE1:Hg19::chr17:19976931..19976957,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92521 | |EntrezGene=92521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30615 | |HGNC=30615 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLR6 | |UniProt=C9JLR6 | ||
|association_with_transcript=0bp_to_ENST00000413167_5end | |association_with_transcript=0bp_to_ENST00000413167_5end | ||
|cluster_id=chr17:19976931..19976957,+ | |||
|coexpression_cluster_id=C3612 | |||
|description=CAGE_peak_3_at_SPECC1_5end | |description=CAGE_peak_3_at_SPECC1_5end | ||
|id=chr17:19976931..19976957,+ | |id=chr17:19976931..19976957,+ | ||
|ontology_enrichment_celltype=CL:0000763!4.35e-42!112;CL:0000049!4.35e-42!112;CL:0000037!1.25e-38!172;CL:0000566!1.25e-38!172;CL:0000766!6.87e-37!76;CL:0002032!1.65e-35!165;CL:0000837!1.65e-35!165;CL:0000988!2.82e-34!182;CL:0000738!6.28e-32!140;CL:0000839!1.29e-31!70;CL:0000557!2.50e-31!71;CL:0002194!9.21e-28!63;CL:0000576!9.21e-28!63;CL:0000040!9.21e-28!63;CL:0000559!9.21e-28!63;CL:0002057!9.52e-27!42;CL:0002009!9.93e-27!65;CL:0002031!6.38e-24!124;CL:0000860!2.50e-23!45;CL:0002087!4.08e-22!119;CL:0002320!1.14e-10!365;CL:0000134!1.88e-10!358;CL:0000219!1.18e-07!390 | |ontology_enrichment_celltype=CL:0000763!4.35e-42!112;CL:0000049!4.35e-42!112;CL:0000037!1.25e-38!172;CL:0000566!1.25e-38!172;CL:0000766!6.87e-37!76;CL:0002032!1.65e-35!165;CL:0000837!1.65e-35!165;CL:0000988!2.82e-34!182;CL:0000738!6.28e-32!140;CL:0000839!1.29e-31!70;CL:0000557!2.50e-31!71;CL:0002194!9.21e-28!63;CL:0000576!9.21e-28!63;CL:0000040!9.21e-28!63;CL:0000559!9.21e-28!63;CL:0002057!9.52e-27!42;CL:0002009!9.93e-27!65;CL:0002031!6.38e-24!124;CL:0000860!2.50e-23!45;CL:0002087!4.08e-22!119;CL:0002320!1.14e-10!365;CL:0000134!1.88e-10!358;CL:0000219!1.18e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.20e-22;33!CL:0002057;2.20e-22;33!CL:0000576;7.99e-22;48!CL:0000473;3.12e-21;39!CL:0000234;3.12e-21;39!CL:0000766;3.44e-20;69!CL:0000763;8.45e-16;100!CL:0000738;1.44e-08;136!CL:0002087;2.62e-07;104!CL:0000094;3.41e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.54e-52,108;CL:0000049,5.54e-52,108;CL:0000766,2.68e-47,72;CL:0000037,7.17e-42,168;CL:0000839,4.04e-40,66;CL:0000557,6.62e-40,67;CL:0002032,6.99e-39,161;CL:0000837,6.99e-39,161;CL:0000988,8.81e-38,177;CL:0002194,1.64e-36,59;CL:0000576,1.64e-36,59;CL:0000040,1.64e-36,59;CL:0000559,1.64e-36,59;CL:0002009,2.00e-34,61;CL:0000738,4.26e-34,136;CL:0000473,2.01e-33,48;CL:0000234,2.01e-33,48;CL:0000860,2.09e-30,42;CL:0002057,2.09e-30,42;CL:0002031,5.91e-25,120;CL:0002087,5.91e-24,115;CL:0000134,1.96e-09,354;CL:0002320,1.04e-08,361;CL:0002393,2.43e-07,9;CL:0002397,2.43e-07,9;CL:0000094,3.42e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.92e-22;42!CL:0000049;3.59e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;2.07e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.15e-08,31;DOID:1240,4.52e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-37!115;UBERON:0002390!2.82e-36!102;UBERON:0003061!2.82e-36!102;UBERON:0002193!1.09e-30!112;UBERON:0002371!1.59e-30!80;UBERON:0001474!2.13e-27!86;UBERON:0004765!7.05e-23!101;UBERON:0001434!7.05e-23!101;UBERON:0002405!2.40e-20!115;UBERON:0001049!8.34e-17!57;UBERON:0005068!8.34e-17!57;UBERON:0006241!8.34e-17!57;UBERON:0007135!8.34e-17!57;UBERON:0002616!4.04e-16!59;UBERON:0003080!3.96e-15!42;UBERON:0002780!9.87e-15!41;UBERON:0001890!9.87e-15!41;UBERON:0006240!9.87e-15!41;UBERON:0000955!2.28e-14!69;UBERON:0006238!2.28e-14!69;UBERON:0001893!1.16e-13!34;UBERON:0002020!3.30e-13!34;UBERON:0003528!3.30e-13!34;UBERON:0002791!3.66e-13!33;UBERON:0001017!4.30e-13!82;UBERON:0001869!9.24e-13!32;UBERON:0005743!5.21e-12!86;UBERON:0002346!1.68e-10!90;UBERON:0003075!1.85e-10!86;UBERON:0007284!1.85e-10!86;UBERON:0002204!2.07e-10!167;UBERON:0002384!4.06e-10!375;UBERON:0002619!4.11e-10!22;UBERON:0000956!4.68e-10!25;UBERON:0000203!4.68e-10!25;UBERON:0000073!1.15e-09!94;UBERON:0001016!1.15e-09!94;UBERON:0001950!2.91e-09!20;UBERON:0003056!1.08e-08!61;UBERON:0000479!1.12e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.68e-11;34!UBERON:0001869;2.58e-11;32!UBERON:0002791;2.85e-11;32!UBERON:0003528;6.15e-11;34!UBERON:0002020;6.15e-11;34!UBERON:0002619;1.18e-10;22!UBERON:0002780;1.61e-10;41!UBERON:0001890;1.61e-10;41!UBERON:0007023;1.05e-09;114!UBERON:0001950;1.08e-09;20!UBERON:0000956;2.26e-09;25!UBERON:0000203;2.26e-09;25!UBERON:0000073;1.18e-08;53!UBERON:0002616;1.18e-08;53!UBERON:0000178;9.04e-07;15!UBERON:0000179;9.04e-07;15!UBERON:0000463;9.04e-07;15 | |||
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|phase1_expression=3.27021082687002,1.71280419112787,4.93340414335899,0,9.38618298297304,0.872338524100369,2.53299878168311,9.47579810140246,4.17897005119742,0,0,0,0,0.618831764800233,0.994192127183747,1.34465029290355,0,0,0,0.246242116153576,0,1.88072832886853,0.572471974262113,3.83248390204076,0.753255837568817,0.305653622991805,0.410502947249729,0.0787107813136792,28.3222279331211,11.8987113410136,15.3267962082915,0,0,0,0.0774672005803016,0,23.4880351467878,21.6058209327432,20.6560780894246,19.096956622995,18.5849843619137,18.1380452970629,20.8636209783691,24.5723023537464,27.9628198329719,30.8081757708527,12.0863099190956,21.3807301771349,24.4668033007132,18.1246207162955,29.2023205443175,26.0130452877444,18.2715210790408,51.6387746867061,33.8566216485854,10.5415710143859,16.3743690034707,16.6295378489363,13.7737751566906,26.6371092473158,28.1308335351578,12.8642007072819,22.9383206264877,28.5570582856905,14.5104619314292,17.5889419654253,25.5357122088186,13.0649305933506,36.5038042894141,37.5736701339852,13.9241885605675,35.3546530548062,36.7096369431426,27.2519319342405,22.3234514963296,24.1107442334632,50.3232267536298,45.6537754238179,74.255221054051,13.9656244433212,15.515500821529,19.3624002990512,0,0,0,3.41384178053206,0,1.14950487990897,0,0.954053754535364,0,0,0.382273228125229,11.8954195721123,3.92355994087075,15.2762769169545,0.196709770113833,0,2.05601498999509,0,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0,0.390178042679635,0,0.276350017785848,0.579606171470105,0.14828656316206,0.535081656179426,0,0.339928028092699,1.14966148080576,0.68725489096526,3.28925599625354,1.91139248594458,1.95325036156926,2.85135613334512,2.40920190524436,2.94369205655162,1.24930726552346,4.02521328474829,3.28451198768419,4.03213486449465,4.01160293675261,1.59306844271079,4.87613732627923,0,0.12786256184353,0,0,0.289693037921647,2.3858578411533,0,1.70162670895322,1.33037638477538,0.351339142772504,5.50112117090393,0,0,5.19275829847493,7.83583817846703,5.85015026283007,6.43924685624423,5.14795419702115,7.05769252526173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3560834872127,23.2668158488995,0,0,0,0,0,1.41867352879343,0,0,0,3.11211035399766,0,0,1.36221684880438,1.15235184896,0,1.24864030732128,0,0.149448680551801,0,0.161872944368132,0.140450806702248,1.63323337003915,0,1.23990937410919,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12899064659632,5.14592750554308,4.14404764057442,7.42988684851167,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,1.77236972004421,0.441463099414651,0,3.94605963686609,0,0,0,0,0,0,0,0.115930404975077,0.587043471179108,0,0,0,0,0,18.4662754565548,6.78612368903789,9.80965671105606,0,0,0,0,0,0,61.5829047369929,60.4012257330731,105.737338925794,92.6691300471062,107.432310845849,0,0.763976851116555,0,1.71072446022705,0,0,0,0.224262168690721,0.43596006883328,0.2933531432838,0,10.7296933755565,0,0.26593811658487,0,1.02882949704857,0,0.799266537048298,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,1.74306691720059,0.299918973546171,6.08118903205952,18.0812552915566,18.9750545534728,0,0,0,0,0,0,2.91421374383171,8.07826116827902,4.09692392233083,5.77543663258868,0.76228387266739,0,0,0.335032530668698,0,41.195386317095,50.8574480646842,23.621684265854,0.49076596687656,0,0.271265023699736,0,0,0,0,9.02838299183157,2.27407504055985,0,0,0,0,1.37060810223918,0.686286847621712,25.8460032653609,18.9828496720383,20.3849635404579,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0.177561725313127,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,0.784306353074702,0,0,0,6.90374778039739,0.366277859273374,0,0,0,0,0,0.616194468458578,1.07452572308291,0,3.6522883255213,4.49551751134108,0.170453254832202,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,1.2655176988749,1.71567174531442,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,1.47775344708365,1.97576935775941,0,0,0,0,0,4.23647103495506,0,0,0,0,36.028780255484,29.0562138714103,31.9002424817531,28.8260448303925,39.4907782162746,27.8843523812868,28.6216661736201,17.4487538784739,0,0,0,0,0.865615277858669,0,1.27541018183058,13.1722385145659,22.2146229353545,9.52531122257473,4.22008522356922,3.65036331547496,35.1481405711116,2.6635582281414,22.557102938106,33.6890637825191,27.6211489178363,32.8933522721408,30.6609291137035,30.2284703385073,15.9765197440398,19.907173602425,21.3566901391243,30.6759309781203,0,0,2.70455678475983,0,4.22961015263549,0,23.441308683503,0,23.068780545438,0,0,0,0,2.98244294329889,14.7702887231038,0,0.659215496907038,0,21.3195347428645,4.42054264849836,0,0,0.492339221844278,0,0,0,14.3240263663524,6.01724774385295,2.3948309234694,0,6.78532922266653,11.9670846628788,1.99613798001194,0,0,10.1499940560871,0,0,0,0,0.291604613383254,0,7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| ||
|short_description=p3@SPECC1 | |short_description=p3@SPECC1 | ||
}} | }} |
Latest revision as of 01:04, 19 September 2015
Short description: | p3@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPECC1_5end |
Coexpression cluster: | C3612_Mast_granulocyte_CD14_migratory_Neutrophils_Whole_acute |
Association with transcript: | 0bp_to_ENST00000413167_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | C9JLR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.54e-52 | 108 |
common myeloid progenitor | 5.54e-52 | 108 |
myeloid leukocyte | 2.68e-47 | 72 |
hematopoietic stem cell | 7.17e-42 | 168 |
myeloid lineage restricted progenitor cell | 4.04e-40 | 66 |
granulocyte monocyte progenitor cell | 6.62e-40 | 67 |
hematopoietic oligopotent progenitor cell | 6.99e-39 | 161 |
hematopoietic multipotent progenitor cell | 6.99e-39 | 161 |
hematopoietic cell | 8.81e-38 | 177 |
monopoietic cell | 1.64e-36 | 59 |
monocyte | 1.64e-36 | 59 |
monoblast | 1.64e-36 | 59 |
promonocyte | 1.64e-36 | 59 |
macrophage dendritic cell progenitor | 2.00e-34 | 61 |
leukocyte | 4.26e-34 | 136 |
defensive cell | 2.01e-33 | 48 |
phagocyte | 2.01e-33 | 48 |
classical monocyte | 2.09e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.09e-30 | 42 |
hematopoietic lineage restricted progenitor cell | 5.91e-25 | 120 |
nongranular leukocyte | 5.91e-24 | 115 |
mesenchymal cell | 1.96e-09 | 354 |
connective tissue cell | 1.04e-08 | 361 |
intermediate monocyte | 2.43e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.43e-07 | 9 |
granulocyte | 3.42e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.15e-08 | 31 |
leukemia | 4.52e-07 | 39 |