FFCP PHASE1:Hg19::chr17:19976626..19976659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92521 | |EntrezGene=92521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30615 | |HGNC=30615 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-250bp_to_uc010cqx.2_5end | |association_with_transcript=-250bp_to_uc010cqx.2_5end | ||
|cluster_id=chr17:19976626..19976659,+ | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_14_at_SPECC1_5end | |description=CAGE_peak_14_at_SPECC1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000451!4.26e-17!10;CL:0000037!1.63e-16!172;CL:0000566!1.63e-16!172;CL:0000738!3.35e-16!140;CL:0000988!1.51e-15!182;CL:0002032!4.76e-14!165;CL:0000837!4.76e-14!165;CL:0000990!1.12e-13!8;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0002031!8.62e-10!124;CL:0000766!1.64e-08!76;CL:0002087!2.95e-08!119;CL:0000840!3.66e-08!5;CL:0001029!3.66e-08!5;CL:0000557!1.34e-07!71;CL:0000839!5.57e-07!70;CL:0000784!5.93e-07!3;CL:0000453!5.93e-07!5 | |ontology_enrichment_celltype=CL:0000451!4.26e-17!10;CL:0000037!1.63e-16!172;CL:0000566!1.63e-16!172;CL:0000738!3.35e-16!140;CL:0000988!1.51e-15!182;CL:0002032!4.76e-14!165;CL:0000837!4.76e-14!165;CL:0000990!1.12e-13!8;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0002031!8.62e-10!124;CL:0000766!1.64e-08!76;CL:0002087!2.95e-08!119;CL:0000840!3.66e-08!5;CL:0001029!3.66e-08!5;CL:0000557!1.34e-07!71;CL:0000839!5.57e-07!70;CL:0000784!5.93e-07!3;CL:0000453!5.93e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;9.69e-37;5!CL:0000451;2.20e-29;10!CL:0000990;8.88e-21;8!CL:0000771;2.60e-11;2!CL:0000094;7.12e-11;8!CL:0000081;3.69e-08;11!CL:0000784;7.26e-08;3!CL:0000775;7.26e-08;3 | |ontology_enrichment_celltype_v019=CL:0000453;9.69e-37;5!CL:0000451;2.20e-29;10!CL:0000990;8.88e-21;8!CL:0000771;2.60e-11;2!CL:0000094;7.12e-11;8!CL:0000081;3.69e-08;11!CL:0000784;7.26e-08;3!CL:0000775;7.26e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,9.70e-37,5;CL:0000451,1.90e-29,10;CL:0000990,8.88e-21,8;CL:0000771,2.47e-11,2;CL:0000738,2.62e-11,136;CL:0000037,2.70e-11,168;CL:0000094,6.61e-11,8;CL:0000988,1.07e-10,177;CL:0002032,1.71e-09,161;CL:0000837,1.71e-09,161;CL:0000081,3.50e-08,11;CL:0000784,6.34e-08,3;CL:0000775,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;6.31e-21;1!DOID:0050177;6.31e-21;1!DOID:0050427;6.31e-21;1 | |ontology_enrichment_disease_v019=DOID:630;6.31e-21;1!DOID:0050177;6.31e-21;1!DOID:0050427;6.31e-21;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,7.72e-21,1;DOID:0050177,7.72e-21,1;DOID:0050427,7.72e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.58e-12!102;UBERON:0003061!3.58e-12!102;UBERON:0002193!5.09e-11!112;UBERON:0007023!1.27e-10!115 | |ontology_enrichment_uberon=UBERON:0002390!3.58e-12!102;UBERON:0003061!3.58e-12!102;UBERON:0002193!5.09e-11!112;UBERON:0007023!1.27e-10!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p14@SPECC1 | |short_description=p14@SPECC1 | ||
}} | }} |
Latest revision as of 01:02, 19 September 2015
Short description: | p14@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SPECC1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -250bp_to_uc010cqx.2_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 9.70e-37 | 5 |
dendritic cell | 1.90e-29 | 10 |
conventional dendritic cell | 8.88e-21 | 8 |
eosinophil | 2.47e-11 | 2 |
leukocyte | 2.62e-11 | 136 |
hematopoietic stem cell | 2.70e-11 | 168 |
granulocyte | 6.61e-11 | 8 |
hematopoietic cell | 1.07e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-09 | 161 |
blood cell | 3.50e-08 | 11 |
plasmacytoid dendritic cell | 6.34e-08 | 3 |
neutrophil | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.72e-21 | 1 |
monogenic disease | 7.72e-21 | 1 |
xeroderma pigmentosum | 7.72e-21 | 1 |