FFCP PHASE1:Hg19::chr10:70992318..70992353,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80201 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23302 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-405bp_to_uc010qje.1_5end | |||
|cluster_id=chr10:70992318..70992353,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_2_at_HKDC1_5end | |||
|id=chr10:70992318..70992353,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.35e-19!254;CL:0000077!2.51e-08!19;CL:0000548!8.31e-07!679;CL:0000004!8.31e-07!679;CL:0000255!8.31e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.44e-08;19!CL:0000064;7.85e-08;3!CL:0000067;7.85e-08;3!CL:0005012;7.85e-08;3!CL:0002304;7.85e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.41e-20,253;CL:0000077,6.74e-08,19;CL:0000064,1.09e-07,3;CL:0000067,1.09e-07,3;CL:0005012,1.09e-07,3;CL:0002304,1.09e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.43e-11;29 | |||
|ontology_enrichment_disease=DOID:14566!1.08e-15!239;DOID:305!1.09e-14!106;DOID:162!2.33e-13!235;DOID:0050687!4.96e-12!143;DOID:193!2.47e-08!29;DOID:2394!2.88e-07!14;DOID:120!4.73e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.65e-19,106;DOID:14566,1.54e-16,239;DOID:0050687,2.33e-15,143;DOID:162,1.55e-13,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.88e-11!9;UBERON:0005156!3.55e-11!59;UBERON:0000990!3.55e-11!59;UBERON:0003100!5.24e-09!41;UBERON:0007625!8.21e-09!11;UBERON:0003133!3.47e-08!48;UBERON:0001048!3.73e-08!168;UBERON:0003134!3.82e-08!37;UBERON:0000474!3.82e-08!37;UBERON:0004176!1.91e-07!22;UBERON:0000991!3.86e-07!21;UBERON:0009196!3.86e-07!21;UBERON:0009117!3.86e-07!21;UBERON:0005564!3.86e-07!21;UBERON:0002323!6.21e-07!46;UBERON:0004458!9.72e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.32e-25;9!UBERON:0001557;5.32e-25;9!UBERON:0007625;8.94e-14;11!UBERON:0002394;2.34e-11;4!UBERON:0003928;2.34e-11;4!UBERON:0000488;2.95e-10;4!UBERON:0002294;6.04e-10;7!UBERON:0001173;6.04e-10;7!UBERON:0001778;7.85e-08;3!UBERON:0001775;7.85e-08;3!UBERON:0000072;8.17e-08;37!UBERON:0000019;2.16e-07;19!UBERON:0000047;2.16e-07;19!UBERON:0004088;2.16e-07;19!UBERON:0010230;2.16e-07;19!UBERON:0000970;5.89e-07;20!UBERON:0002203;7.60e-07;6!UBERON:0001768;7.60e-07;6!UBERON:0002200;7.60e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.36e-25,9;UBERON:0007625,9.23e-14,11;UBERON:0001557,8.64e-11,19;UBERON:0000488,4.27e-10,4;UBERON:0008947,3.57e-08,38;UBERON:0003258,3.57e-08,38;UBERON:0001048,3.91e-08,160;UBERON:0001778,1.09e-07,3;UBERON:0001775,1.09e-07,3;UBERON:0002294,1.24e-07,9;UBERON:0001173,1.24e-07,9;UBERON:0004912,1.24e-07,9;UBERON:0002394,1.49e-07,6;UBERON:0003928,1.49e-07,6;UBERON:0000019,5.98e-07,20;UBERON:0000047,5.98e-07,20;UBERON:0010312,5.98e-07,20;UBERON:0004088,5.98e-07,20;UBERON:0010230,5.98e-07,20;UBERON:0003072,5.98e-07,20;UBERON:0004128,5.98e-07,20;UBERON:0003071,5.98e-07,20;UBERON:0002203,9.63e-07,6;UBERON:0001768,9.63e-07,6;UBERON:0002200,9.63e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0.37129905888014,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0.486634870302636,1.22895262313288,1.55210578223795,1.05401742831751,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.926864265692532,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0,0.269421344139376,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.150238058906597,0,0.717558542755448,0.213557388818567,0.211931901159562,0,0.103052529238439,0.772921620136887,0.744467425326359,0,0,0,0,0,0.355009592516614,0.302256294682921,0.339121184620975,0.773043412653187,0,0.286804595389004,0,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,4.14073800139454,4.88895601226495,7.71235295627142,5.5146986366197,4.79334777003293,8.54174228799948,5.25842101824641,6.08286541888573,6.54070166808864,0,0,0,0,0,0,0,0,0.491953754172454,3.43135620597051,0.109750285408626,0,1.60846355858609,0,0,0,2.88662684050547,1.62302566965108,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,2.81201501960331,0.503946384596579,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,3.61727252471503,0,1.3996218765488,0,0,0,1.19812427745791,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.473107245101804,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,0,0.604780586659361,0,0.460385919864187,1.12264037773229,0.384417447767103,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.362578348774867,0.40101294060657,2.67034867914099,0.34444334449382,0,0.917870904715969,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15480300279334,2.29610251989794,0.650756789328606,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.577332676353072,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,14.7024129588619,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,1.53580351049616,0,0,0.445234820091624,0,0,0,0,0,0.102268682502155,0,0.933118762985422,5.0326276642503,6.26574111364632,0,0,0,4.44547960578548,0,0,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.557694977114413,0,1.25336261431701,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0,0,0,3.32326936353593,1.98595173525299,1.2557316736289,1.19472429772959,0,5.96301093956496,1.73559738335131,0.0979923974143777,1.13176968554523,0,0.171986032471617,0.967563312890852,1.31560770755134,1.23173185579814,0.0969890164884194,0,0.225980740780532,0.137041924646751,0.794858446811959,0,0,32.3841633816196,0,0.39961921916426,0,0,0,0.576219191952599,10.5614655230618,2.12124631155116,0.815425236441684,0.209205692624666,0.407992870545287,1.73370353940911,0,0,0,3.0083580899397,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,2.68931008999267,2.49489756515279,0,0,0,1.62899880526114,0.864221491201268,4.57222304153173,0,0,0.170388021785422,0.906496732161005,0,0,0,0,0,16.9155605356001,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35265819698172,0,0,0,0.233713309847224,0,0,0.251567901752575,0,3.43260102595385,0,0.15543720058278,0,0.318593534327405,2.24901556081802,0.155262956876259,0,0.265841714557995,1.04349012362347,0.150257608997218,2.28483127301277,0.406870733204662,0.181848659202559,0.751873899297419,2.78420255927096,0.398095888698616,0,0,0,0,3.85239660814607,0.214441591374926,0,2.04035332961045,0,0,0.179088841081487,0.617602894321944,0.657852148736121,0.706756583783524,0.964570191354574,3.54779125371453,0,57.341436727379,6.68491903590241,0,0,0,0,0.327609848846413,44.7306693931769,2.11312123358627,0,0,0,1.70254786070051,0,1.11903606175556,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,3.23887471053385,0.235939446695481,0,0,0.381382095467167,0,0,0.0752103283492573,0.20170506870352,0,0,2.12903492763126,3.84425824164318,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0.171488009437418,0,0,7.8007934983419,0.333694205676207,0,0,4.48435461302062,0,0,0,0,0,0,0,0,0,0,0,0,1.77498001095848,1.363414476146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| |||
|short_description=p2@HKDC1 | |||
}} |
Latest revision as of 00:51, 19 September 2015
Short description: | p2@HKDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HKDC1_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -405bp_to_uc010qje.1_5end |
EntrezGene: | HKDC1 |
HGNC: | 23302 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.41e-20 | 253 |
mesothelial cell | 6.74e-08 | 19 |
ciliated cell | 1.09e-07 | 3 |
ciliated epithelial cell | 1.09e-07 | 3 |
multi-ciliated epithelial cell | 1.09e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.36e-25 | 9 |
pigment epithelium of eye | 9.23e-14 | 11 |
upper respiratory tract | 8.64e-11 | 19 |
atypical epithelium | 4.27e-10 | 4 |
respiratory primordium | 3.57e-08 | 38 |
endoderm of foregut | 3.57e-08 | 38 |
primordium | 3.91e-08 | 160 |
ciliary epithelium | 1.09e-07 | 3 |
ciliary body | 1.09e-07 | 3 |
biliary system | 1.24e-07 | 9 |
biliary tree | 1.24e-07 | 9 |
biliary bud | 1.24e-07 | 9 |
bile duct | 1.49e-07 | 6 |
digestive system duct | 1.49e-07 | 6 |
camera-type eye | 5.98e-07 | 20 |
simple eye | 5.98e-07 | 20 |
immature eye | 5.98e-07 | 20 |
ocular region | 5.98e-07 | 20 |
eyeball of camera-type eye | 5.98e-07 | 20 |
optic cup | 5.98e-07 | 20 |
optic vesicle | 5.98e-07 | 20 |
eye primordium | 5.98e-07 | 20 |
vasculature of eye | 9.63e-07 | 6 |
uvea | 9.63e-07 | 6 |
vasculature of head | 9.63e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.65e-19 | 106 |
disease of cellular proliferation | 1.54e-16 | 239 |
cell type cancer | 2.33e-15 | 143 |
cancer | 1.55e-13 | 235 |