FFCP PHASE1:Hg19::chr2:9695750..9695775,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:9695750..9695775,- to FFCP PHASE1:Hg19::chr2:9695750..9695775,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6868 | |EntrezGene=6868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=195 | |HGNC=195 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=127bp_to_ENST00000478059_5end | |||
|cluster_id=chr2:9695750..9695775,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_ADAM17_5end | |||
|id=chr2:9695750..9695775,- | |||
|ontology_enrichment_celltype=CL:0002057!7.30e-18!42;CL:0000860!1.35e-16!45;CL:0000766!1.11e-13!76;CL:0002009!8.74e-13!65;CL:0002194!6.23e-12!63;CL:0000576!6.23e-12!63;CL:0000040!6.23e-12!63;CL:0000559!6.23e-12!63;CL:0000557!8.63e-12!71;CL:0000839!8.71e-11!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-35;33!CL:0002057;1.57e-35;33!CL:0000473;1.81e-27;39!CL:0000234;1.81e-27;39!CL:0000576;8.67e-20;48!CL:0000766;1.41e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.01e-38,42;CL:0002057,9.01e-38,42;CL:0000473,2.09e-35,48;CL:0000234,2.09e-35,48;CL:0000766,1.48e-29,72;CL:0002009,2.66e-29,61;CL:0000557,2.30e-27,67;CL:0002194,2.98e-27,59;CL:0000576,2.98e-27,59;CL:0000040,2.98e-27,59;CL:0000559,2.98e-27,59;CL:0000839,7.85e-25,66;CL:0000763,4.20e-18,108;CL:0000049,4.20e-18,108;CL:0000738,1.73e-14,136;CL:0002087,2.68e-11,115;CL:0002031,1.52e-10,120;CL:0000988,3.36e-10,177;CL:0000037,1.02e-09,168;CL:0002032,2.16e-08,161;CL:0000837,2.16e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.95e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.76e-11!102;UBERON:0003061!2.76e-11!102;UBERON:0002193!1.01e-10!112;UBERON:0002371!3.15e-09!80;UBERON:0001474!6.37e-09!86;UBERON:0004765!1.12e-07!101;UBERON:0001434!1.12e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-22,76;UBERON:0001474,1.72e-22,82;UBERON:0002390,5.51e-21,98;UBERON:0003061,5.51e-21,98;UBERON:0004765,2.59e-19,90;UBERON:0002193,9.84e-18,108;UBERON:0002405,3.60e-16,93;UBERON:0001434,4.29e-16,100;UBERON:0003081,1.96e-11,203;UBERON:0000926,2.10e-11,315;UBERON:0004120,2.10e-11,315;UBERON:0006603,2.10e-11,315;UBERON:0002204,4.52e-09,167 | |||
|phase1_expression=0.54503513781167,1.2846031433459,1.40954404095971,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0,0.783556884599516,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.410623275218653,0.376627918784408,0,0,0.0787107813136792,2.75354993794233,1.53531759238885,1.85779347979291,0,0.30120591877825,0.739508020333575,0.697204805222715,0.995184627411951,0,7.75593571944628,6.41742231904453,4.99125002646459,0,0.647787332037959,0.257575567634187,1.89017710413434,2.26725566213286,2.66842467306598,3.0215774797739,3.28934310417461,4.95530193432166,4.60307827715441,2.30544635876191,5.67557351732605,13.7898272294647,6.45484683583826,8.12558919566051,1.50593871634084,1.63743690034707,4.04502272001152,8.87643287875617,6.73950956859797,12.1474053901818,1.31940520074686,1.19678194572979,3.40979800426155,7.83564944297177,4.53908179752912,14.3249117268982,2.26123798731069,4.69334626578181,3.25783267057675,5.44859552370032,4.41933163185078,10.7597211729901,0.422510572623884,0.212604299965044,0.419317291016752,0.112328631146495,0.300353785683013,0.32145117339416,0.570025487482497,0,1.0959849225878,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,4.48406850385229,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0,0,0,0.222820913770347,0,0,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,4.87613732627923,1.34140171940727,0.895037932904712,0.361439152384566,0,0.144846518960824,0,0.486634870302636,1.03988298880475,0.665188192387692,0.614843499851882,0.523916301990851,0,0,0.324547393654683,0.696518949197069,0.132957960518865,0.476981248610684,1.14398982156026,0,0.596287222100115,0,0.694281003215189,0,1.25849830862972,0.275118041940067,0,0.775250277507987,0,0.66944122552934,0,0,0.24406205754817,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0.949265659568129,0,2.63560834872127,3.87780264148325,0,0,0.12663051166458,1.45650098894541,2.58152958673932,0,0,0,0.24666754841716,0.622422070799533,1.75123873690594,0.163461903113459,0.454072282934794,2.30470369792,0,0.624320153660641,0,0,0.352303495931295,0.323745888736263,0.140450806702248,0.204154171254893,0,0.723280468230358,0,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0.554128230968366,0.438977620880838,0,0.45071417671979,0.453728732640084,1.07633781413317,0.213557388818567,0.211931901159562,0.600182192168805,0.412210116953756,0.772921620136887,0,0.843881661206331,0.0974370051611986,0.757301322732344,0.276149695926898,0.646584227275248,0.710019185033229,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.609868530647977,0.397589304964456,0.69716365721711,0.310983165046111,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0.882926198829301,0.614942192715568,0.514703430895577,0,0,0.100528972411631,0.555530670951178,0.325808305310325,0,0,0.34779121492523,0.70445216541493,0.577465791044295,0.462985512576611,0.951270761172991,0.790204397959275,0,0,1.8720341211139,1.0404181360211,0,0.671928512795438,0.141775097242386,0.626909658919938,0.871901815541886,0,118.239177095026,0.264145302039678,0.207328115540772,0.144119953416961,0.37872730027914,0.507983154337352,0,0,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0,1.50719688529793,2.61460037580088,1.3996218765488,0,0.502257091432126,0,0.239624855491583,1.14861935834114,1.42636905040718,0.434343920002738,0.410952645100767,0.358121926479791,0.448340575974109,0.394061520403854,0.431255149719035,0.513372145118994,1.77866236955724,5.20559415430487,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0,0.500170521059677,0.271265023699736,1.45579603071565,0.713715955188647,0.157702415033935,0.234282829985426,0.902838299183157,0,0,0,0,0.434418072340414,0,0.343143423810856,1.24060815673732,2.5885704098234,1.38745825144478,0,0,0,0.744323423456331,1.07423381301644,0.280660094433074,0.384417447767103,1.53512174720011,0.64341568457443,1.48418066444991,0.308419387605311,0,0.328508624055237,0.519254429183621,0.348631135379878,0.483437798366489,0,0.276242966807689,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.863663664408557,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0.412164046590889,0,0.330037999682352,0,0,1.6068392984416,0.773365746336976,0.308097234229289,0.460511024178389,0.413509717453592,0.537101224341368,0.870100163485371,0.170453254832202,1.06838442776085,0.495854746082934,0.960950336825531,1.02090169995667,0.4046311234222,0,0.94443704049192,0.6970372701606,0.616067160352178,0,0,0,0.572499546967965,0.372158369359667,0.316379424718726,0.571890581771475,0,0.855877976067841,0.318203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| ||
|short_description=p4@ADAM17 | |||
}} | }} |
Latest revision as of 00:50, 19 September 2015
Short description: | p4@ADAM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADAM17_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 127bp_to_ENST00000478059_5end |
EntrezGene: | ADAM17 |
HGNC: | 195 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.01e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.01e-38 | 42 |
defensive cell | 2.09e-35 | 48 |
phagocyte | 2.09e-35 | 48 |
myeloid leukocyte | 1.48e-29 | 72 |
macrophage dendritic cell progenitor | 2.66e-29 | 61 |
granulocyte monocyte progenitor cell | 2.30e-27 | 67 |
monopoietic cell | 2.98e-27 | 59 |
monocyte | 2.98e-27 | 59 |
monoblast | 2.98e-27 | 59 |
promonocyte | 2.98e-27 | 59 |
myeloid lineage restricted progenitor cell | 7.85e-25 | 66 |
myeloid cell | 4.20e-18 | 108 |
common myeloid progenitor | 4.20e-18 | 108 |
leukocyte | 1.73e-14 | 136 |
nongranular leukocyte | 2.68e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.52e-10 | 120 |
hematopoietic cell | 3.36e-10 | 177 |
hematopoietic stem cell | 1.02e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.16e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-22 | 76 |
bone element | 1.72e-22 | 82 |
hematopoietic system | 5.51e-21 | 98 |
blood island | 5.51e-21 | 98 |
skeletal element | 2.59e-19 | 90 |
hemolymphoid system | 9.84e-18 | 108 |
immune system | 3.60e-16 | 93 |
skeletal system | 4.29e-16 | 100 |
lateral plate mesoderm | 1.96e-11 | 203 |
mesoderm | 2.10e-11 | 315 |
mesoderm-derived structure | 2.10e-11 | 315 |
presumptive mesoderm | 2.10e-11 | 315 |
musculoskeletal system | 4.52e-09 | 167 |