FFCP PHASE1:Hg19::chr5:82767350..82767362,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1462 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2464 | |||
|TSSclassifier=strong | |||
|UniProt=P13611 | |||
|association_with_transcript=66bp_to_ENST00000265077_5end | |||
|cluster_id=chr5:82767350..82767362,+ | |||
|coexpression_cluster_id=C4523 | |||
|description=CAGE_peak_7_at_VCAN_5end | |||
|id=chr5:82767350..82767362,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.04e-17!42;CL:0000055!5.36e-15!180;CL:0000860!2.29e-14!45;CL:0000393!1.85e-08!60;CL:0000211!1.85e-08!60;CL:0002194!5.94e-08!63;CL:0000576!5.94e-08!63;CL:0000040!5.94e-08!63;CL:0000559!5.94e-08!63;CL:0002009!3.57e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-18;33!CL:0002057;2.30e-18;33!CL:0000473;8.22e-12;39!CL:0000234;8.22e-12;39!CL:0000576;1.20e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.46e-18,42;CL:0002057,1.46e-18,42;CL:0000473,1.90e-14,48;CL:0000234,1.90e-14,48;CL:0002194,5.58e-09,59;CL:0000576,5.58e-09,59;CL:0000040,5.58e-09,59;CL:0000559,5.58e-09,59;CL:0002009,2.60e-08,61;CL:0000034,2.15e-07,441;CL:0000393,3.50e-07,61;CL:0000211,3.50e-07,61;CL:0000839,7.33e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.92e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.42e-13!659;UBERON:0001017!1.20e-11!82;UBERON:0000073!2.15e-10!94;UBERON:0001016!2.15e-10!94;UBERON:0000922!2.30e-10!612;UBERON:0000467!3.26e-10!625;UBERON:0005743!3.48e-10!86;UBERON:0000480!5.03e-10!626;UBERON:0002204!1.09e-09!167;UBERON:0002050!1.51e-08!605;UBERON:0005423!1.51e-08!605;UBERON:0001049!2.00e-08!57;UBERON:0005068!2.00e-08!57;UBERON:0006241!2.00e-08!57;UBERON:0007135!2.00e-08!57;UBERON:0000923!2.61e-08!604;UBERON:0005291!2.61e-08!604;UBERON:0006598!2.61e-08!604;UBERON:0002532!2.61e-08!604;UBERON:0002616!6.20e-08!59;UBERON:0000955!1.39e-07!69;UBERON:0006238!1.39e-07!69;UBERON:0000062!7.92e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.10e-07,167;UBERON:0001017,1.32e-07,81;UBERON:0001016,1.84e-07,89 | |||
|phase1_expression=1.63510541343501,1.07050261945492,1.55049844505568,0,1.34088328328186,1.74467704820074,0,0,0.261185628199839,0.491467873003018,0,0,0.527533956456907,0.37129905888014,1.65698687863958,0,0.602694528023977,2.19093027116212,1.95173119516203,1.84681587115182,1.63200552995402,2.5076377718247,6.86966369114536,4.92747930262383,6.27713197974014,0,0,0,0,1.15148819429164,3.71558695958582,0,0.30120591877825,0,0,0,0,3.87796785972314,3.60980005446255,4.55722828503289,0,0.32389366601898,0.515151135268373,4.50734540216651,2.26725566213286,3.63876091781724,5.34586784883075,4.11167888021826,1.85823822537062,5.75384784644301,1.0246428261164,1.18241114944293,3.10271112662957,4.51839278508678,8.12558919566051,3.76484679085209,2.72906150057846,1.79778787556068,6.42776173978895,2.56743221660875,1.91801137739712,5.60747210317417,3.39088217956774,2.13112375266347,3.77272010217159,3.97169657283798,1.86846674698672,7.03496262718881,3.65038042894141,4.56096573880745,1.81619850790011,2.94622108790052,2.53169909952708,1.26753171787165,0.637812899895131,0.209658645508376,2.80821577866238,5.40636814229423,4.8217676009124,0.855038231223746,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,1.40648818027883,1.80719576192283,1.50401373190767,0.434539556882471,0.795285947051099,0.486634870302636,3.78139268656271,3.54767035940102,7.11461764114321,0.327447688744282,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,1.03366703667732,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,2.15271869829786,4.237093786023,18.0707071071753,5.32002573297536,1.12135520028461,0,0.49333509683432,2.8008993185979,2.69421344139376,1.9615428373615,1.96764655938411,1.15235184896,0.468642863667593,0.312160076830321,0,0.149448680551801,2.46612447151906,1.94247533241758,2.10676210053373,0,0.491337269247072,0.309977343527296,0,0.494533858557114,0,0,2.86171393721913,1.87677779807946,0.277064115484183,0.438977620880838,1.22595118319608,1.05166641234618,1.70148274740032,6.81680615617675,0.85422955527427,0.423863802319124,3.60109315301283,1.33968288009971,2.31876486041066,0.558350568994769,7.59493495085698,1.65642908774038,3.02920529092937,1.38074847963449,0.323292113637624,10.6502877754984,2.11579406278045,0.508681776931463,0,0,0,7.80631719229411,6.22889911110981,8.01738205799677,10.6770886665832,6.30802127189071,8.39447925874409,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,2.74508496477641,0,0,0,0.462942225792648,0,0,0,0.811512834825538,10.6841911754598,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0.671928512795438,0,0.895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,1.34557301214433,1.74384027533312,1.1734125731352,1.93907573636667,0,0,2.12750493267896,0,0.514414748524284,1.41849132023278,1.0656887160644,0.142977993658148,0,0.823240336780769,1.62868092146868,0.355391948742546,1.58390374586686,0.301439377059586,1.74306691720059,0.199945982364114,0,0,0,0.958499421966331,0,4.27910715122155,0.434343920002738,0,0.716243852959582,0,0.197030760201927,0,0.128343036279748,1.01637849688985,5.20559415430487,1.54657762555539,2.68026024534958,1.91381625495949,0,0,0,1.8403723757871,1.00034104211935,0.271265023699736,2.07970861530807,2.14114786556594,0.157702415033935,1.99140405487612,1.20378439891088,4.5481500811197,3.10419213877515,6.64225598535437,1.65932251687533,0.955719759148911,0.195801157462741,0,1.24060815673732,1.94142780736755,1.49418580924822,0,0,0,2.23297027036899,10.5888761568763,3.36792113319688,2.30650468660262,2.55853624533352,4.3430558708774,0,0.925258162815933,0.887808626565635,1.31403449622095,0.519254429183621,1.16210378459959,1.57117284469109,1.20303882181971,0,0.459257792658427,1.27463817604702,0,0.902399225814824,1.77135275340154,4.70609861506113,1.46139224653261,3.79985864014353,0,0.170093705276516,1.51141141271498,1.54227252690289,2.16757150035082,3.01013864312912,0.254876273045038,0,3.1342465661105,0,0,0,0,0,0.412164046590889,1.09883357782012,0.41254749960294,0.574265537996172,0,0,1.93341436584244,2.00263202249038,1.99554777143968,3.1702411671442,2.0409846524972,1.59518363305651,2.55679882248303,1.24644849905432,0,0.384380134730212,0.127612712494584,0.10115778085555,0,11.0184321390724,1.3940745403212,0.924100740528266,1.59691809095107,3.47973196830029,2.22389062924704,1.71749864090389,1.116475108079,1.58189712359363,0.38126038784765,0,1.28381696410176,0.636406495851874,1.56989728039846,1.79872457583315,4.11805544604082,3.29874726567922,1.01091240786658,0,1.26377536871694,0.48763373908959,0.974853958525138,2.11300293513511,0.9554993798559,1.27264888758341,0,2.2054613741845,1.99031692572366,0.438450885253763,0,0,0.608731130888112,0.92947049429925,1.40847801266121,2.72481569187698,0.589494246078727,0.7133421029625,1.06428319221179,0,0.658589785919804,0,0.349934720244983,0,0,0,0.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| |||
|short_description=p7@VCAN | |||
}} |
Latest revision as of 00:38, 19 September 2015
Short description: | p7@VCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_VCAN_5end |
Coexpression cluster: | C4523_Fibroblast_iPS_H9_serous_Smooth_HES3GFP_hepatoblastoma |
Association with transcript: | 66bp_to_ENST00000265077_5end |
EntrezGene: | VCAN |
HGNC: | 2464 |
UniProt: | P13611 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.46e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-18 | 42 |
defensive cell | 1.90e-14 | 48 |
phagocyte | 1.90e-14 | 48 |
monopoietic cell | 5.58e-09 | 59 |
monocyte | 5.58e-09 | 59 |
monoblast | 5.58e-09 | 59 |
promonocyte | 5.58e-09 | 59 |
macrophage dendritic cell progenitor | 2.60e-08 | 61 |
stem cell | 2.15e-07 | 441 |
electrically responsive cell | 3.50e-07 | 61 |
electrically active cell | 3.50e-07 | 61 |
myeloid lineage restricted progenitor cell | 7.33e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.10e-07 | 167 |
central nervous system | 1.32e-07 | 81 |
nervous system | 1.84e-07 | 89 |