FFCP PHASE1:Hg19::chr17:1958388..1958404,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:1958388..1958404,+ to FFCP PHASE1:Hg19::chr17:1958388..1958404,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3090 | |EntrezGene=3090 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4909 | |HGNC=4909 | ||
|TSSclassifier=strong | |||
|UniProt=A0PJI1,Q14526 | |UniProt=A0PJI1,Q14526 | ||
|association_with_transcript=0bp_to_ENST00000399849,NM_006497_5end | |||
|cluster_id=chr17:1958388..1958404,+ | |||
|description=CAGE_peak_1_at_HIC1_5end | |||
|id=chr17:1958388..1958404,+ | |||
|ontology_enrichment_celltype=CL:0000183!3.87e-21!59;CL:0000222!3.32e-20!119;CL:0000187!2.56e-19!54;CL:0000680!4.35e-18!57;CL:0000056!4.35e-18!57;CL:0000355!4.35e-18!57;CL:0000393!1.99e-14!60;CL:0000211!1.99e-14!60;CL:0000192!3.33e-14!42;CL:0000514!3.33e-14!42;CL:0000055!6.82e-14!180;CL:0000359!4.03e-10!32;CL:0000057!1.99e-08!75;CL:0000048!3.16e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.95e-11;55!CL:0000192;8.01e-11;43!CL:0000359;5.94e-10;32!CL:0000393;1.35e-08;61!CL:0000211;1.35e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.49e-21,121;CL:0000187,3.28e-20,55;CL:0000680,6.07e-19,58;CL:0000056,6.07e-19,58;CL:0000355,6.07e-19,58;CL:0000393,3.17e-15,61;CL:0000211,3.17e-15,61;CL:0000192,5.85e-15,43;CL:0000514,5.85e-15,43;CL:0000359,2.53e-10,32;CL:0000057,3.31e-09,76;CL:0000048,1.09e-08,427;CL:0000723,7.75e-08,433;CL:0000115,7.08e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;8.01e-11;43!CL:0000355;1.62e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.18e-22!79;UBERON:0007798!5.18e-22!79;UBERON:0004872!8.89e-22!84;UBERON:0001009!1.48e-21!113;UBERON:0004535!2.52e-21!110;UBERON:0004290!4.97e-20!70;UBERON:0002385!9.01e-20!63;UBERON:0001015!9.01e-20!63;UBERON:0000383!9.01e-20!63;UBERON:0001134!2.03e-19!61;UBERON:0002036!2.03e-19!61;UBERON:0003082!2.03e-19!61;UBERON:0000055!3.27e-18!69;UBERON:0001981!2.06e-17!60;UBERON:0007500!2.06e-17!60;UBERON:0004537!2.06e-17!60;UBERON:0006965!2.06e-17!60;UBERON:0000914!8.83e-17!83;UBERON:0002329!8.83e-17!83;UBERON:0003077!8.83e-17!83;UBERON:0003059!8.83e-17!83;UBERON:0007282!8.83e-17!83;UBERON:0009618!8.83e-17!83;UBERON:0007285!8.83e-17!83;UBERON:0000490!3.32e-16!138;UBERON:0000486!5.42e-16!82;UBERON:0003914!1.57e-14!118;UBERON:0001637!2.38e-13!42;UBERON:0003509!2.38e-13!42;UBERON:0004572!2.38e-13!42;UBERON:0005256!2.05e-12!143;UBERON:0000119!9.23e-11!312;UBERON:0004573!1.35e-10!33;UBERON:0004571!1.35e-10!33;UBERON:0000483!4.98e-10!309;UBERON:0003081!4.06e-09!216;UBERON:0007100!5.82e-08!27;UBERON:0000948!6.64e-08!24;UBERON:0005498!6.64e-08!24;UBERON:0004140!6.64e-08!24;UBERON:0009881!6.64e-08!24;UBERON:0004141!6.64e-08!24;UBERON:0003084!6.64e-08!24;UBERON:0007005!6.64e-08!24;UBERON:0004139!6.64e-08!24;UBERON:0004291!6.64e-08!24;UBERON:0000477!7.32e-08!286;UBERON:0004111!1.51e-07!241;UBERON:0002100!1.68e-07!216;UBERON:0000926!2.32e-07!448;UBERON:0004120!2.32e-07!448;UBERON:0006603!2.32e-07!448;UBERON:0001013!2.51e-07!14;UBERON:0002204!3.55e-07!167;UBERON:0000947!5.29e-07!21;UBERON:0010191!5.29e-07!21;UBERON:0000025!5.63e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.76e-10;42!UBERON:0003509;3.76e-10;42!UBERON:0004572;3.76e-10;42!UBERON:0004573;4.92e-10;33!UBERON:0004571;4.92e-10;33!UBERON:0007500;2.42e-09;56!UBERON:0001981;2.42e-09;56!UBERON:0004537;2.42e-09;56!UBERON:0002385;4.00e-09;31!UBERON:0001015;4.00e-09;31!UBERON:0000383;4.00e-09;31!UBERON:0002049;8.75e-09;75!UBERON:0007798;8.75e-09;75!UBERON:0000055;1.92e-08;65!UBERON:0001013;1.90e-07;14!UBERON:0007100;2.51e-07;25!UBERON:0000948;2.68e-07;22!UBERON:0000947;4.13e-07;21!UBERON:0010191;4.13e-07;21!UBERON:0001009;4.19e-07;112 | |||
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| ||
|short_description=p1@HIC1 | |||
}} | }} |
Latest revision as of 00:33, 19 September 2015
Short description: | p1@HIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000399849, NM_006497_5end |
EntrezGene: | HIC1 |
HGNC: | 4909 |
UniProt: | A0PJI1Q14526 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.49e-21 | 121 |
muscle cell | 3.28e-20 | 55 |
muscle precursor cell | 6.07e-19 | 58 |
myoblast | 6.07e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.07e-19 | 58 |
electrically responsive cell | 3.17e-15 | 61 |
electrically active cell | 3.17e-15 | 61 |
smooth muscle cell | 5.85e-15 | 43 |
smooth muscle myoblast | 5.85e-15 | 43 |
vascular associated smooth muscle cell | 2.53e-10 | 32 |
fibroblast | 3.31e-09 | 76 |
multi fate stem cell | 1.09e-08 | 427 |
somatic stem cell | 7.75e-08 | 433 |
endothelial cell | 7.08e-07 | 36 |