FFCP PHASE1:Hg19::chr18:21572813..21572830,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125488 | |EntrezGene=125488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |HGNC=26595 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N584 | |UniProt=Q8N584 | ||
|association_with_transcript=76bp_to_ENST00000304621,NM_153211,uc002kuu.2_5end | |association_with_transcript=76bp_to_ENST00000304621,NM_153211,uc002kuu.2_5end | ||
|cluster_id=chr18:21572813..21572830,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_16_at_TTC39C_5end | |description=CAGE_peak_16_at_TTC39C_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!9.81e-22!18;CL:0000789!9.81e-22!18;CL:0002420!9.81e-22!18;CL:0002419!9.81e-22!18;CL:0000790!9.81e-22!18;CL:0000084!6.42e-17!25;CL:0000827!6.42e-17!25;CL:0000624!3.34e-16!6;CL:0000738!2.23e-10!140;CL:0000625!2.33e-10!11;CL:0000838!1.02e-09!52;CL:0000542!1.88e-09!53;CL:0000051!1.88e-09!53;CL:0002087!4.23e-09!119;CL:0000898!5.40e-09!3;CL:0000623!7.33e-08!3;CL:0000825!7.33e-08!3;CL:0000037!5.91e-07!172;CL:0000566!5.91e-07!172;CL:0002031!7.07e-07!124 | |ontology_enrichment_celltype=CL:0000791!9.81e-22!18;CL:0000789!9.81e-22!18;CL:0002420!9.81e-22!18;CL:0002419!9.81e-22!18;CL:0000790!9.81e-22!18;CL:0000084!6.42e-17!25;CL:0000827!6.42e-17!25;CL:0000624!3.34e-16!6;CL:0000738!2.23e-10!140;CL:0000625!2.33e-10!11;CL:0000838!1.02e-09!52;CL:0000542!1.88e-09!53;CL:0000051!1.88e-09!53;CL:0002087!4.23e-09!119;CL:0000898!5.40e-09!3;CL:0000623!7.33e-08!3;CL:0000825!7.33e-08!3;CL:0000037!5.91e-07!172;CL:0000566!5.91e-07!172;CL:0002031!7.07e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000624;3.34e-54;6!CL:0000791;8.72e-49;18!CL:0000789;8.72e-49;18!CL:0002419;8.72e-49;18!CL:0000084;9.48e-35;25!CL:0000898;2.71e-28;3!CL:0000815;1.97e-19;2!CL:0000792;1.97e-19;2!CL:0002677;1.97e-19;2!CL:0000625;2.24e-13;11!CL:0000895;1.19e-10;1!CL:0000542;1.35e-10;53 | |ontology_enrichment_celltype_v019=CL:0000624;3.34e-54;6!CL:0000791;8.72e-49;18!CL:0000789;8.72e-49;18!CL:0002419;8.72e-49;18!CL:0000084;9.48e-35;25!CL:0000898;2.71e-28;3!CL:0000815;1.97e-19;2!CL:0000792;1.97e-19;2!CL:0002677;1.97e-19;2!CL:0000625;2.24e-13;11!CL:0000895;1.19e-10;1!CL:0000542;1.35e-10;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.67e-55,6;CL:0000791,4.65e-49,18;CL:0000789,4.65e-49,18;CL:0002420,4.65e-49,18;CL:0002419,4.65e-49,18;CL:0000790,4.65e-49,18;CL:0000084,6.05e-35,25;CL:0000827,6.05e-35,25;CL:0000898,1.71e-28,3;CL:0000815,1.13e-19,2;CL:0000792,1.13e-19,2;CL:0002677,1.13e-19,2;CL:0000838,1.84e-19,52;CL:0000542,4.61e-19,53;CL:0000051,4.61e-19,53;CL:0000625,2.51e-13,11;CL:0002087,4.31e-11,115;CL:0000738,1.20e-10,136;CL:0000810,1.30e-10,1;CL:0000895,1.30e-10,1;CL:0002436,1.30e-10,1;CL:0002427,1.30e-10,1;CL:0002428,1.30e-10,1;CL:0002429,1.30e-10,1;CL:0002433,1.30e-10,1;CL:0002431,1.30e-10,1;CL:0002432,1.30e-10,1;CL:0002031,7.22e-09,120;CL:0000037,3.47e-08,168;CL:0000988,1.19e-07,177;CL:0002032,2.59e-07,161;CL:0000837,2.59e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;8.72e-49;18!CL:0002427;1.19e-10;1!CL:0000051;1.35e-10;53 | |ontology_enrichment_development_v019=CL:0000790;8.72e-49;18!CL:0002427;1.19e-10;1!CL:0000051;1.35e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.88e-21!9;UBERON:0001557!1.64e-13!19;UBERON:0000178!3.86e-07!15;UBERON:0000179!3.86e-07!15;UBERON:0000463!3.86e-07!15 | |ontology_enrichment_uberon=UBERON:0001737!6.88e-21!9;UBERON:0001557!1.64e-13!19;UBERON:0000178!3.86e-07!15;UBERON:0000179!3.86e-07!15;UBERON:0000463!3.86e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96709770113833,2.35806457649499,1.85041349099558,0.501559486172034,1.95553359980154,1.4203434172042,0,0.334231370655521,13.8464776513173,11.9628303075155,13.5401931882508,0.512365278902701,0.780356085359269,0.164437904603676,0,0,0,0.267540828089713,0,0.113309342697566,2.29932296161153,4.12352934579156,4.80737414837055,0.318565414324097,0,0,1.05402583354441,1.4078527226986,0,0.473554504088034,0,2.41928091869679,1.33720097891754,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.01150814046861,0.482022059766964,0.661763836394364,0.871517776369625,0.237270619111097,1.07865046528132,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.998361463831671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0.471464371102113,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96709770113833,2.35806457649499,1.85041349099558,0.501559486172034,1.95553359980154,1.4203434172042,0,0.334231370655521,13.8464776513173,11.9628303075155,13.5401931882508,0.512365278902701,0.780356085359269,0.164437904603676,0,0,0,0.267540828089713,0,0.113309342697566,2.29932296161153,4.12352934579156,4.80737414837055,0.318565414324097,0,0,1.05402583354441,1.4078527226986,0,0.473554504088034,0,2.41928091869679,1.33720097891754,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.01150814046861,0.482022059766964,0.661763836394364,0.871517776369625,0.237270619111097,1.07865046528132,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.998361463831671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0.471464371102113,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@TTC39C | |short_description=p16@TTC39C | ||
}} | }} |
Latest revision as of 00:27, 19 September 2015
Short description: | p16@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TTC39C_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 76bp_to_ENST00000304621, NM_153211, uc002kuu.2_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | Q8N584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data