FFCP PHASE1:Hg19::chr11:63580940..63580974,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144097 | |EntrezGene=144097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25115 | |HGNC=25115 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUA3 | |UniProt=Q9BUA3 | ||
|association_with_transcript=17bp_to_NM_138471,uc001nxt.2_5end | |association_with_transcript=17bp_to_NM_138471,uc001nxt.2_5end | ||
|cluster_id=chr11:63580940..63580974,+ | |||
|description=CAGE_peak_3_at_C11orf84_5end | |description=CAGE_peak_3_at_C11orf84_5end | ||
|id=chr11:63580940..63580974,+ | |id=chr11:63580940..63580974,+ | ||
|ontology_enrichment_celltype=CL:0000333!4.23e-11!41;CL:0000133!2.41e-09!59;CL:0000055!1.41e-07!180;CL:0000221!9.16e-07!71 | |ontology_enrichment_celltype=CL:0000333!4.23e-11!41;CL:0000133!2.41e-09!59;CL:0000055!1.41e-07!180;CL:0000221!9.16e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.27e-11,41;CL:0000133,7.93e-10,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.72e-11!194;UBERON:0004111!2.57e-11!241;UBERON:0000119!2.87e-11!312;UBERON:0000483!4.59e-11!309;UBERON:0000475!5.28e-11!365;UBERON:0000477!3.36e-10!286;UBERON:0000924!3.52e-10!173;UBERON:0006601!3.52e-10!173;UBERON:0004121!4.17e-10!169;UBERON:0000073!1.53e-09!94;UBERON:0001016!1.53e-09!94;UBERON:0000481!2.80e-09!347;UBERON:0001017!4.99e-08!82;UBERON:0005743!5.19e-08!86;UBERON:0000033!6.47e-08!123;UBERON:0001981!8.28e-08!60;UBERON:0007500!8.28e-08!60;UBERON:0004537!8.28e-08!60;UBERON:0006965!8.28e-08!60;UBERON:0000955!1.50e-07!69;UBERON:0006238!1.50e-07!69;UBERON:0000153!3.19e-07!129;UBERON:0007811!3.19e-07!129;UBERON:0002049!4.29e-07!79;UBERON:0007798!4.29e-07!79;UBERON:0003914!4.51e-07!118;UBERON:0000064!5.88e-07!219 | |ontology_enrichment_uberon=UBERON:0000025!1.72e-11!194;UBERON:0004111!2.57e-11!241;UBERON:0000119!2.87e-11!312;UBERON:0000483!4.59e-11!309;UBERON:0000475!5.28e-11!365;UBERON:0000477!3.36e-10!286;UBERON:0000924!3.52e-10!173;UBERON:0006601!3.52e-10!173;UBERON:0004121!4.17e-10!169;UBERON:0000073!1.53e-09!94;UBERON:0001016!1.53e-09!94;UBERON:0000481!2.80e-09!347;UBERON:0001017!4.99e-08!82;UBERON:0005743!5.19e-08!86;UBERON:0000033!6.47e-08!123;UBERON:0001981!8.28e-08!60;UBERON:0007500!8.28e-08!60;UBERON:0004537!8.28e-08!60;UBERON:0006965!8.28e-08!60;UBERON:0000955!1.50e-07!69;UBERON:0006238!1.50e-07!69;UBERON:0000153!3.19e-07!129;UBERON:0007811!3.19e-07!129;UBERON:0002049!4.29e-07!79;UBERON:0007798!4.29e-07!79;UBERON:0003914!4.51e-07!118;UBERON:0000064!5.88e-07!219 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.60e-11,192;UBERON:0004111,4.30e-11,240;UBERON:0001016,7.38e-10,89;UBERON:0004121,1.00e-09,171;UBERON:0000924,1.00e-09,171;UBERON:0006601,1.00e-09,171;UBERON:0000119,1.20e-09,309;UBERON:0000483,1.88e-09,306;UBERON:0001017,3.79e-08,81;UBERON:0000955,1.36e-07,68;UBERON:0006238,1.36e-07,68;UBERON:0007500,1.72e-07,59;UBERON:0001981,1.72e-07,59;UBERON:0004537,1.72e-07,59;UBERON:0006965,1.72e-07,59;UBERON:0003914,3.81e-07,117;UBERON:0002049,7.63e-07,78;UBERON:0007798,7.63e-07,78 | |||
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| ||
|short_description=p3@C11orf84 | |short_description=p3@C11orf84 | ||
}} | }} |
Latest revision as of 00:22, 19 September 2015
Short description: | p3@C11orf84 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C11orf84_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_NM_138471, uc001nxt.2_5end |
EntrezGene: | C11orf84 |
HGNC: | 25115 |
UniProt: | Q9BUA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.27e-11 | 41 |
neurectodermal cell | 7.93e-10 | 59 |
Ontology term | p-value | n |
---|---|---|
tube | 2.60e-11 | 192 |
anatomical conduit | 4.30e-11 | 240 |
nervous system | 7.38e-10 | 89 |
ectoderm-derived structure | 1.00e-09 | 171 |
ectoderm | 1.00e-09 | 171 |
presumptive ectoderm | 1.00e-09 | 171 |
cell layer | 1.20e-09 | 309 |
epithelium | 1.88e-09 | 306 |
central nervous system | 3.79e-08 | 81 |
brain | 1.36e-07 | 68 |
future brain | 1.36e-07 | 68 |
epithelial tube open at both ends | 1.72e-07 | 59 |
blood vessel | 1.72e-07 | 59 |
blood vasculature | 1.72e-07 | 59 |
vascular cord | 1.72e-07 | 59 |
epithelial tube | 3.81e-07 | 117 |
vasculature | 7.63e-07 | 78 |
vascular system | 7.63e-07 | 78 |