FFCP PHASE1:Hg19::chrX:108780205..108780217,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55916 | |EntrezGene=55916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18151 | |HGNC=18151 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPJ8 | |UniProt=Q9NPJ8 | ||
|association_with_transcript=100bp_to_ENST00000372106_5end | |association_with_transcript=100bp_to_ENST00000372106_5end | ||
|cluster_id=chrX:108780205..108780217,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_6_at_NXT2_5end | |description=CAGE_peak_6_at_NXT2_5end | ||
|id=chrX:108780205..108780217,+ | |id=chrX:108780205..108780217,+ | ||
|ontology_enrichment_celltype=CL:0002032!1.62e-17!165;CL:0000837!1.62e-17!165;CL:0000988!1.94e-17!182;CL:0000037!3.09e-17!172;CL:0000566!3.09e-17!172;CL:0000738!6.83e-16!140;CL:0002031!1.01e-15!124;CL:0002057!2.63e-15!42;CL:0000763!3.72e-14!112;CL:0000049!3.72e-14!112;CL:0000860!8.00e-14!45;CL:0000557!2.48e-13!71;CL:0002087!2.81e-13!119;CL:0000839!1.64e-12!70;CL:0002009!3.31e-12!65;CL:0002194!4.09e-11!63;CL:0000576!4.09e-11!63;CL:0000040!4.09e-11!63;CL:0000559!4.09e-11!63;CL:0000766!4.33e-11!76 | |ontology_enrichment_celltype=CL:0002032!1.62e-17!165;CL:0000837!1.62e-17!165;CL:0000988!1.94e-17!182;CL:0000037!3.09e-17!172;CL:0000566!3.09e-17!172;CL:0000738!6.83e-16!140;CL:0002031!1.01e-15!124;CL:0002057!2.63e-15!42;CL:0000763!3.72e-14!112;CL:0000049!3.72e-14!112;CL:0000860!8.00e-14!45;CL:0000557!2.48e-13!71;CL:0002087!2.81e-13!119;CL:0000839!1.64e-12!70;CL:0002009!3.31e-12!65;CL:0002194!4.09e-11!63;CL:0000576!4.09e-11!63;CL:0000040!4.09e-11!63;CL:0000559!4.09e-11!63;CL:0000766!4.33e-11!76 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.61e-21;5!CL:0000860;1.16e-15;33!CL:0002057;1.16e-15;33!CL:0000990;6.58e-12;8!CL:0000576;1.34e-11;48!CL:0000473;9.21e-11;39!CL:0000234;9.21e-11;39!CL:0000451;9.24e-10;10!CL:0000766;3.03e-07;69!CL:0000763;8.53e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.15e-21,5;CL:0000763,2.24e-21,108;CL:0000049,2.24e-21,108;CL:0002032,1.14e-17,161;CL:0000837,1.14e-17,161;CL:0002009,4.93e-17,61;CL:0000037,9.71e-17,168;CL:0000738,5.63e-16,136;CL:0000988,1.19e-15,177;CL:0000557,2.76e-15,67;CL:0002194,4.06e-15,59;CL:0000576,4.06e-15,59;CL:0000040,4.06e-15,59;CL:0000559,4.06e-15,59;CL:0000766,4.88e-14,72;CL:0000860,2.72e-13,42;CL:0002057,2.72e-13,42;CL:0000839,2.83e-13,66;CL:0000990,5.92e-12,8;CL:0000473,2.05e-11,48;CL:0000234,2.05e-11,48;CL:0002031,2.19e-11,120;CL:0002087,1.81e-10,115;CL:0000451,8.48e-10,10;CL:0000134,5.59e-07,354;CL:0002320,9.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.51e-07,39;DOID:8692,9.17e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.56e-12!102;UBERON:0003061!5.56e-12!102;UBERON:0002371!1.97e-11!80;UBERON:0001474!1.06e-10!86;UBERON:0002193!1.42e-10!112;UBERON:0002405!5.60e-09!115;UBERON:0004765!1.14e-07!101;UBERON:0001434!1.14e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!5.56e-12!102;UBERON:0003061!5.56e-12!102;UBERON:0002371!1.97e-11!80;UBERON:0001474!1.06e-10!86;UBERON:0002193!1.42e-10!112;UBERON:0002405!5.60e-09!115;UBERON:0004765!1.14e-07!101;UBERON:0001434!1.14e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.43e-07;1!UBERON:0006518;1.43e-07;1!UBERON:0008949;1.43e-07;1!UBERON:0000101;1.43e-07;1!UBERON:0002167;1.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.57e-13,76;UBERON:0001474,5.06e-12,82;UBERON:0002390,3.46e-11,98;UBERON:0003061,3.46e-11,98;UBERON:0004765,1.01e-10,90;UBERON:0002405,2.71e-10,93;UBERON:0002193,6.88e-10,108;UBERON:0001434,2.16e-09,100;UBERON:0002171,7.76e-08,1;UBERON:0006518,7.76e-08,1;UBERON:0008949,7.76e-08,1;UBERON:0000101,7.76e-08,1;UBERON:0002167,7.76e-08,1 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0,0,0,0,0.382067028739756,0,0.157421562627358,0.393364276848904,0,0,0,0,0,0.387336002901508,0,0.293600439334847,0.553995408531877,0.601633342410425,0.651032612147555,0.447830948479849,0,0,0.581592955118259,0.755751887377619,0.242584061187816,0.232429036905685,0.411167888021826,1.23882548358041,2.01384674625505,0.512321413058201,1.41889337933151,2.41321976515633,0.645484683583826,1.35426486594342,0.752969358170419,0.545812300115692,1.57306439111559,0.918251677112708,0.962787081228281,1.27867425159808,0,0.598390972864896,0.852449501065388,0.290209238628584,0,0.622822248995575,0,0,1.08594422352558,0.605399502633369,1.10483290796269,1.26584954976354,0.422510572623884,0.850417199860174,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0.889509253863555,0,0.800791974072025,0,0.661044872784862,0.954053754535364,0.569212969109448,1.17447437874188,0,0,0.560508562981536,0.263384084775077,0.393419540227666,0,0.411202997999018,0.334372990781356,0,0,0,0.222820913770347,0.589211814949674,0.886135578334485,0.541607727530031,0.128091319725675,0.260118695119756,0.164437904603676,0,0.579606171470105,0.14828656316206,1.07016331235885,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0,0,1.00803371612366,0.267440195783507,0.579297615531196,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0.232387885739037,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,0.414656231081544,0.288239906833923,0.25248486685276,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0,0.394061520403854,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0.164254312027618,0,0,0.362578348774867,0,0.0920809889358963,0.229628896329213,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.27470839445503,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.330569830721956,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0.245040215981032,0.371606350251437,0,0.355709216742071,0.159426272728822,0.199579371432817,0.191505370132367,0.211673582723883,0,0.561594356226918,0.228234679033192,0.626719583092093,0,0,1.4452926759333,5.44859209415828,0.425846237690326,0.343505344755765,1.84344458585075,1.11838053946208,1.00109485027145,0.586164286206121,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0.568272293612826,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0.556543525114529,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0,1.02314474045374,0.197286811273867,0,0,0,0.371072392647405,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0.21787692703798,0,0.153900517007594,0.569710279235006,0,0.807818799687949,0,0,0.274792780205587,0.533034776018635,1.02193298195737,0,0.332423363800313,0,0,0,0.189753732724185,0.317873157960757,0.421996129056054,0,0,0.216388639742091,0,0.0884575645033392,0,0.593042257361244,0.494255755786011,0.313265848516366,0.067401132980677,0,0.234264445725339,0.547364367646998,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0,0,0,0.569219092059585,0.138674673013139,0,0.195984794828755,0,0.17472666824203,0,0,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0.195551382734803,0.160317640503067,0,0,0,0.114536596165916,0,0.288109595976299,0.124252535565433,0,0,0,0,0,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| ||
|short_description=p6@NXT2 | |short_description=p6@NXT2 | ||
}} | }} |
Latest revision as of 00:21, 19 September 2015
Short description: | p6@NXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NXT2_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 100bp_to_ENST00000372106_5end |
EntrezGene: | NXT2 |
HGNC: | 18151 |
UniProt: | Q9NPJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.15e-21 | 5 |
myeloid cell | 2.24e-21 | 108 |
common myeloid progenitor | 2.24e-21 | 108 |
hematopoietic oligopotent progenitor cell | 1.14e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-17 | 161 |
macrophage dendritic cell progenitor | 4.93e-17 | 61 |
hematopoietic stem cell | 9.71e-17 | 168 |
leukocyte | 5.63e-16 | 136 |
hematopoietic cell | 1.19e-15 | 177 |
granulocyte monocyte progenitor cell | 2.76e-15 | 67 |
monopoietic cell | 4.06e-15 | 59 |
monocyte | 4.06e-15 | 59 |
monoblast | 4.06e-15 | 59 |
promonocyte | 4.06e-15 | 59 |
myeloid leukocyte | 4.88e-14 | 72 |
classical monocyte | 2.72e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.72e-13 | 42 |
myeloid lineage restricted progenitor cell | 2.83e-13 | 66 |
conventional dendritic cell | 5.92e-12 | 8 |
defensive cell | 2.05e-11 | 48 |
phagocyte | 2.05e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 2.19e-11 | 120 |
nongranular leukocyte | 1.81e-10 | 115 |
dendritic cell | 8.48e-10 | 10 |
mesenchymal cell | 5.59e-07 | 354 |
connective tissue cell | 9.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.57e-13 | 76 |
bone element | 5.06e-12 | 82 |
hematopoietic system | 3.46e-11 | 98 |
blood island | 3.46e-11 | 98 |
skeletal element | 1.01e-10 | 90 |
immune system | 2.71e-10 | 93 |
hemolymphoid system | 6.88e-10 | 108 |
skeletal system | 2.16e-09 | 100 |
lower lobe of right lung | 7.76e-08 | 1 |
right lung lobe | 7.76e-08 | 1 |
lower lobe of lung | 7.76e-08 | 1 |
lobe of lung | 7.76e-08 | 1 |
right lung | 7.76e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.51e-07 | 39 |
myeloid leukemia | 9.17e-07 | 31 |