FFCP PHASE1:Hg19::chr6:44233252..44233296,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4794 | |EntrezGene=4794 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7799 | |HGNC=7799 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=203bp_to_ENST00000477930_5end | |association_with_transcript=203bp_to_ENST00000477930_5end | ||
|cluster_id=chr6:44233252..44233296,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_NFKBIE_5end | |description=CAGE_peak_1_at_NFKBIE_5end | ||
|id=chr6:44233252..44233296,- | |id=chr6:44233252..44233296,- | ||
|ontology_enrichment_celltype=CL:0000860;6.90e-20;33!CL:0002057;6.90e-20;33!CL:0000473;2.94e-19;39!CL:0000234;2.94e-19;39!CL:0000576;4.86e-18;48!CL:0000766;3.57e-16;69!CL:0000763;9.46e-10;100!CL:0000738;1.37e-09;136!CL:0002087;5.12e-09;104!CL:0000988;1.92e-07;177!CL:0000451;2.56e-07;10 | |ontology_enrichment_celltype=CL:0000738!9.40e-37!140;CL:0000766!9.54e-34!76;CL:0000988!1.93e-33!182;CL:0000037!1.22e-32!172;CL:0000566!1.22e-32!172;CL:0002032!1.52e-30!165;CL:0000837!1.52e-30!165;CL:0000557!6.22e-30!71;CL:0000763!7.24e-29!112;CL:0000049!7.24e-29!112;CL:0002009!8.99e-29!65;CL:0002087!1.07e-27!119;CL:0002194!1.59e-27!63;CL:0000576!1.59e-27!63;CL:0000040!1.59e-27!63;CL:0000559!1.59e-27!63;CL:0002057!1.40e-26!42;CL:0002031!2.71e-26!124;CL:0000839!4.70e-26!70;CL:0000860!3.43e-22!45;CL:0000063!7.61e-14!578;CL:0000012!1.67e-09!682;CL:0000144!3.04e-09!625;CL:0000548!9.32e-09!679;CL:0000004!9.32e-09!679;CL:0000255!9.32e-09!679;CL:0000213!2.74e-08!57;CL:0000215!2.74e-08!57;CL:0002371!3.22e-08!591;CL:0000134!2.55e-07!358;CL:0000451!2.68e-07!10;CL:0002078!4.92e-07!44;CL:0000003!5.91e-07!722 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;6.90e-20;33!CL:0002057;6.90e-20;33!CL:0000473;2.94e-19;39!CL:0000234;2.94e-19;39!CL:0000576;4.86e-18;48!CL:0000766;3.57e-16;69!CL:0000763;9.46e-10;100!CL:0000738;1.37e-09;136!CL:0002087;5.12e-09;104!CL:0000988;1.92e-07;177!CL:0000451;2.56e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.61e-40,136;CL:0000766,1.59e-38,72;CL:0000988,6.42e-36,177;CL:0000037,2.48e-35,168;CL:0000557,1.49e-34,67;CL:0002009,1.45e-33,61;CL:0002032,3.40e-33,161;CL:0000837,3.40e-33,161;CL:0002194,2.80e-32,59;CL:0000576,2.80e-32,59;CL:0000040,2.80e-32,59;CL:0000559,2.80e-32,59;CL:0000763,3.74e-32,108;CL:0000049,3.74e-32,108;CL:0002087,9.28e-31,115;CL:0000839,2.71e-30,66;CL:0000473,1.18e-29,48;CL:0000234,1.18e-29,48;CL:0002031,3.56e-29,120;CL:0000860,1.40e-26,42;CL:0002057,1.40e-26,42;CL:0000213,2.08e-08,58;CL:0000215,2.08e-08,58;CL:0000134,6.62e-08,354;CL:0000451,2.68e-07,10;CL:0002320,3.48e-07,361;CL:0002078,3.75e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-19;42!CL:0000049;3.47e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.24e-33!112;UBERON:0002390!4.11e-31!102;UBERON:0003061!4.11e-31!102;UBERON:0002371!1.40e-26!80;UBERON:0001474!3.02e-26!86;UBERON:0002405!1.03e-25!115;UBERON:0003081!1.30e-19!216;UBERON:0004765!3.07e-19!101;UBERON:0001434!3.07e-19!101;UBERON:0002204!8.45e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.40e-37,108;UBERON:0002390,8.61e-35,98;UBERON:0003061,8.61e-35,98;UBERON:0002405,9.44e-33,93;UBERON:0002371,1.72e-30,76;UBERON:0001474,6.20e-30,82;UBERON:0004765,3.86e-26,90;UBERON:0001434,1.03e-20,100;UBERON:0003081,3.30e-19,203;UBERON:0002204,2.62e-08,167;UBERON:0000926,5.88e-08,315;UBERON:0004120,5.88e-08,315;UBERON:0006603,5.88e-08,315;UBERON:0002384,9.61e-07,371 | |||
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| ||
|short_description=p1@NFKBIE | |short_description=p1@NFKBIE | ||
}} | }} |
Latest revision as of 00:18, 19 September 2015
Short description: | p1@NFKBIE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFKBIE_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 203bp_to_ENST00000477930_5end |
EntrezGene: | NFKBIE |
HGNC: | 7799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.61e-40 | 136 |
myeloid leukocyte | 1.59e-38 | 72 |
hematopoietic cell | 6.42e-36 | 177 |
hematopoietic stem cell | 2.48e-35 | 168 |
granulocyte monocyte progenitor cell | 1.49e-34 | 67 |
macrophage dendritic cell progenitor | 1.45e-33 | 61 |
hematopoietic oligopotent progenitor cell | 3.40e-33 | 161 |
hematopoietic multipotent progenitor cell | 3.40e-33 | 161 |
monopoietic cell | 2.80e-32 | 59 |
monocyte | 2.80e-32 | 59 |
monoblast | 2.80e-32 | 59 |
promonocyte | 2.80e-32 | 59 |
myeloid cell | 3.74e-32 | 108 |
common myeloid progenitor | 3.74e-32 | 108 |
nongranular leukocyte | 9.28e-31 | 115 |
myeloid lineage restricted progenitor cell | 2.71e-30 | 66 |
defensive cell | 1.18e-29 | 48 |
phagocyte | 1.18e-29 | 48 |
hematopoietic lineage restricted progenitor cell | 3.56e-29 | 120 |
classical monocyte | 1.40e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-26 | 42 |
lining cell | 2.08e-08 | 58 |
barrier cell | 2.08e-08 | 58 |
mesenchymal cell | 6.62e-08 | 354 |
dendritic cell | 2.68e-07 | 10 |
connective tissue cell | 3.48e-07 | 361 |
meso-epithelial cell | 3.75e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.40e-37 | 108 |
hematopoietic system | 8.61e-35 | 98 |
blood island | 8.61e-35 | 98 |
immune system | 9.44e-33 | 93 |
bone marrow | 1.72e-30 | 76 |
bone element | 6.20e-30 | 82 |
skeletal element | 3.86e-26 | 90 |
skeletal system | 1.03e-20 | 100 |
lateral plate mesoderm | 3.30e-19 | 203 |
musculoskeletal system | 2.62e-08 | 167 |
mesoderm | 5.88e-08 | 315 |
mesoderm-derived structure | 5.88e-08 | 315 |
presumptive mesoderm | 5.88e-08 | 315 |
connective tissue | 9.61e-07 | 371 |