FFCP PHASE1:Hg19::chr10:70848335..70848349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5552 | |EntrezGene=5552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9361 | |HGNC=9361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=467bp_to_uc001jpa.1_5end | |association_with_transcript=467bp_to_uc001jpa.1_5end | ||
|cluster_id=chr10:70848335..70848349,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_10_at_SRGN_5end | |description=CAGE_peak_10_at_SRGN_5end | ||
|id=chr10:70848335..70848349,+ | |id=chr10:70848335..70848349,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.37e-59!42;CL:0000738!2.57e-54!140;CL:0000860!2.89e-54!45;CL:0000037!2.56e-52!172;CL:0000566!2.56e-52!172;CL:0000766!1.95e-51!76;CL:0002032!5.72e-49!165;CL:0000837!5.72e-49!165;CL:0000988!5.34e-48!182;CL:0002087!7.90e-46!119;CL:0002031!6.82e-43!124;CL:0000763!1.94e-42!112;CL:0000049!1.94e-42!112;CL:0002009!4.08e-40!65;CL:0002194!9.43e-40!63;CL:0000576!9.43e-40!63;CL:0000040!9.43e-40!63;CL:0000559!9.43e-40!63;CL:0000557!1.76e-39!71;CL:0000839!2.69e-38!70;CL:0002320!1.56e-15!365;CL:0000134!3.89e-15!358;CL:0002393!1.55e-14!9;CL:0002397!1.55e-14!9;CL:0000094!2.98e-14!8;CL:0000791!7.66e-12!18;CL:0000789!7.66e-12!18;CL:0002420!7.66e-12!18;CL:0002419!7.66e-12!18;CL:0000790!7.66e-12!18;CL:0000219!9.95e-12!390;CL:0000081!8.20e-10!11;CL:0000048!4.41e-09!430;CL:0000723!1.20e-08!436;CL:0000034!4.34e-08!444;CL:0000625!1.01e-07!11;CL:0000084!1.33e-07!25;CL:0000827!1.33e-07!25;CL:0000838!1.71e-07!52;CL:0000542!2.97e-07!53;CL:0000051!2.97e-07!53;CL:0000624!9.85e-07!6 | |ontology_enrichment_celltype=CL:0002057!3.37e-59!42;CL:0000738!2.57e-54!140;CL:0000860!2.89e-54!45;CL:0000037!2.56e-52!172;CL:0000566!2.56e-52!172;CL:0000766!1.95e-51!76;CL:0002032!5.72e-49!165;CL:0000837!5.72e-49!165;CL:0000988!5.34e-48!182;CL:0002087!7.90e-46!119;CL:0002031!6.82e-43!124;CL:0000763!1.94e-42!112;CL:0000049!1.94e-42!112;CL:0002009!4.08e-40!65;CL:0002194!9.43e-40!63;CL:0000576!9.43e-40!63;CL:0000040!9.43e-40!63;CL:0000559!9.43e-40!63;CL:0000557!1.76e-39!71;CL:0000839!2.69e-38!70;CL:0002320!1.56e-15!365;CL:0000134!3.89e-15!358;CL:0002393!1.55e-14!9;CL:0002397!1.55e-14!9;CL:0000094!2.98e-14!8;CL:0000791!7.66e-12!18;CL:0000789!7.66e-12!18;CL:0002420!7.66e-12!18;CL:0002419!7.66e-12!18;CL:0000790!7.66e-12!18;CL:0000219!9.95e-12!390;CL:0000081!8.20e-10!11;CL:0000048!4.41e-09!430;CL:0000723!1.20e-08!436;CL:0000034!4.34e-08!444;CL:0000625!1.01e-07!11;CL:0000084!1.33e-07!25;CL:0000827!1.33e-07!25;CL:0000838!1.71e-07!52;CL:0000542!2.97e-07!53;CL:0000051!2.97e-07!53;CL:0000624!9.85e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-44;33!CL:0002057;1.11e-44;33!CL:0000473;1.39e-35;39!CL:0000234;1.39e-35;39!CL:0000576;5.06e-34;48!CL:0000766;1.33e-30;69!CL:0000094;5.10e-26;8!CL:0002393;4.29e-25;6!CL:0002397;4.29e-25;6!CL:0000081;1.20e-18;11!CL:0000763;1.11e-14;100!CL:0000775;2.72e-14;3!CL:0000226;4.79e-13;3!CL:0000842;4.79e-13;3!CL:0002087;8.46e-13;104!CL:0000771;3.90e-10;2!CL:0000738;1.22e-09;136!CL:0000988;5.65e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.68e-67,72;CL:0000860,7.60e-66,42;CL:0002057,7.60e-66,42;CL:0000473,1.91e-61,48;CL:0000234,1.91e-61,48;CL:0002194,8.67e-48,59;CL:0000576,8.67e-48,59;CL:0000040,8.67e-48,59;CL:0000559,8.67e-48,59;CL:0000738,1.02e-47,136;CL:0002009,5.02e-46,61;CL:0000839,2.17e-45,66;CL:0000763,1.02e-44,108;CL:0000049,1.02e-44,108;CL:0000557,1.28e-44,67;CL:0000037,4.07e-39,168;CL:0000988,1.12e-36,177;CL:0002087,7.58e-36,115;CL:0002032,7.12e-35,161;CL:0000837,7.12e-35,161;CL:0002031,1.07e-29,120;CL:0000094,4.53e-26,8;CL:0000081,1.10e-18,11;CL:0002393,2.16e-16,9;CL:0002397,2.16e-16,9;CL:0000775,2.62e-14,3;CL:0000134,8.71e-14,354;CL:0002320,2.44e-13,361;CL:0000226,6.56e-13,3;CL:0000842,6.56e-13,3;CL:0000219,9.17e-12,386;CL:0000771,4.00e-10,2;CL:0000048,7.75e-10,427;CL:0000723,1.43e-09,433;CL:0000034,3.15e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.77e-45;42!CL:0000049;2.66e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.41e-41!102;UBERON:0003061!9.41e-41!102;UBERON:0002193!8.50e-37!112;UBERON:0002371!5.19e-35!80;UBERON:0001474!1.72e-31!86;UBERON:0004765!1.02e-25!101;UBERON:0001434!1.02e-25!101;UBERON:0002405!3.85e-24!115;UBERON:0002384!5.09e-15!375;UBERON:0003081!7.31e-12!216;UBERON:0002204!5.62e-10!167;UBERON:0000178!2.02e-07!15;UBERON:0000179!2.02e-07!15;UBERON:0000463!2.02e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!9.41e-41!102;UBERON:0003061!9.41e-41!102;UBERON:0002193!8.50e-37!112;UBERON:0002371!5.19e-35!80;UBERON:0001474!1.72e-31!86;UBERON:0004765!1.02e-25!101;UBERON:0001434!1.02e-25!101;UBERON:0002405!3.85e-24!115;UBERON:0002384!5.09e-15!375;UBERON:0003081!7.31e-12!216;UBERON:0002204!5.62e-10!167;UBERON:0000178!2.02e-07!15;UBERON:0000179!2.02e-07!15;UBERON:0000463!2.02e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.41e-40,98;UBERON:0003061,1.41e-40,98;UBERON:0002371,1.40e-38,76;UBERON:0002193,3.97e-36,108;UBERON:0001474,2.76e-35,82;UBERON:0004765,1.45e-31,90;UBERON:0002405,2.46e-30,93;UBERON:0001434,9.50e-28,100;UBERON:0003081,1.20e-15,203;UBERON:0002204,6.14e-14,167;UBERON:0002384,9.93e-13,371;UBERON:0000926,2.07e-07,315;UBERON:0004120,2.07e-07,315;UBERON:0006603,2.07e-07,315 | |||
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|short_description=p10@SRGN | |short_description=p10@SRGN | ||
}} | }} |
Latest revision as of 00:18, 19 September 2015
Short description: | p10@SRGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SRGN_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 467bp_to_uc001jpa.1_5end |
EntrezGene: | SRGN |
HGNC: | 9361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-40 | 98 |
blood island | 1.41e-40 | 98 |
bone marrow | 1.40e-38 | 76 |
hemolymphoid system | 3.97e-36 | 108 |
bone element | 2.76e-35 | 82 |
skeletal element | 1.45e-31 | 90 |
immune system | 2.46e-30 | 93 |
skeletal system | 9.50e-28 | 100 |
lateral plate mesoderm | 1.20e-15 | 203 |
musculoskeletal system | 6.14e-14 | 167 |
connective tissue | 9.93e-13 | 371 |
mesoderm | 2.07e-07 | 315 |
mesoderm-derived structure | 2.07e-07 | 315 |
presumptive mesoderm | 2.07e-07 | 315 |