FFCP PHASE1:Hg19::chr10:70847386..70847398,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:70847386..70847398,+ to FFCP PHASE1:Hg19::chr10:70847386..70847398,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5552 | |EntrezGene=5552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9361 | |HGNC=9361 | ||
|TSSclassifier=strong | |||
|UniProt=P10124 | |UniProt=P10124 | ||
|association_with_transcript=-429bp_to_NM_002727,NR_036430,uc001joz.2_5end | |||
|cluster_id=chr10:70847386..70847398,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_SRGN_5end | |||
|id=chr10:70847386..70847398,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.04e-74!140;CL:0000037!4.09e-73!172;CL:0000566!4.09e-73!172;CL:0000988!2.65e-68!182;CL:0002032!8.34e-68!165;CL:0000837!8.34e-68!165;CL:0002087!4.78e-60!119;CL:0002031!1.91e-58!124;CL:0000763!7.20e-46!112;CL:0000049!7.20e-46!112;CL:0000766!3.19e-45!76;CL:0002057!5.18e-41!42;CL:0002009!1.55e-39!65;CL:0002194!5.92e-38!63;CL:0000576!5.92e-38!63;CL:0000040!5.92e-38!63;CL:0000559!5.92e-38!63;CL:0000839!6.81e-38!70;CL:0000557!3.00e-37!71;CL:0000860!3.30e-37!45;CL:0000134!1.07e-20!358;CL:0002320!1.35e-19!365;CL:0000542!2.84e-18!53;CL:0000051!2.84e-18!53;CL:0000838!9.90e-18!52;CL:0000219!9.20e-16!390;CL:0000048!4.32e-13!430;CL:0000034!1.34e-12!444;CL:0000723!1.97e-12!436;CL:0000451!5.22e-12!10;CL:0000990!1.56e-10!8;CL:0000094!1.58e-10!8;CL:0000084!1.06e-09!25;CL:0000827!1.06e-09!25;CL:0000840!1.40e-07!5;CL:0001029!1.40e-07!5;CL:0000945!3.85e-07!24;CL:0000826!3.85e-07!24;CL:0000081!4.77e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.80e-61;33!CL:0002057;9.80e-61;33!CL:0000473;4.65e-44;39!CL:0000234;4.65e-44;39!CL:0000576;2.72e-41;48!CL:0000766;3.35e-29;69!CL:0002087;3.17e-18;104!CL:0000738;5.62e-18;136!CL:0000094;1.07e-14;8!CL:0000763;2.92e-14;100!CL:0000990;1.85e-11;8!CL:0000081;2.46e-10;11!CL:0000988;6.23e-10;177!CL:0002393;1.07e-09;6!CL:0002397;1.07e-09;6!CL:0000451;3.59e-09;10!CL:0000775;7.26e-09;3!CL:0000219;2.14e-08;193!CL:0000226;4.23e-07;3!CL:0000842;4.23e-07;3!CL:0000623;9.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.78e-77,136;CL:0000766,2.17e-76,72;CL:0000860,2.57e-69,42;CL:0002057,2.57e-69,42;CL:0002194,3.25e-69,59;CL:0000576,3.25e-69,59;CL:0000040,3.25e-69,59;CL:0000559,3.25e-69,59;CL:0002087,1.50e-66,115;CL:0002009,1.53e-66,61;CL:0000037,1.88e-64,168;CL:0000473,2.02e-62,48;CL:0000234,2.02e-62,48;CL:0000839,1.46e-60,66;CL:0000988,3.16e-60,177;CL:0002032,5.04e-60,161;CL:0000837,5.04e-60,161;CL:0000557,1.80e-59,67;CL:0000763,1.09e-56,108;CL:0000049,1.09e-56,108;CL:0002031,1.91e-56,120;CL:0000134,1.52e-21,354;CL:0002320,9.28e-21,361;CL:0000219,5.35e-18,386;CL:0000034,6.34e-15,441;CL:0000094,9.75e-15,8;CL:0000048,1.24e-14,427;CL:0000723,3.59e-14,433;CL:0000990,8.04e-12,8;CL:0000081,2.31e-10,11;CL:0000451,1.85e-09,10;CL:0000775,7.29e-09,3;CL:0000226,3.68e-07,3;CL:0000842,3.68e-07,3;CL:0000623,9.13e-07,3;CL:0000825,9.13e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-50;42!CL:0000049;3.17e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.86e-50!102;UBERON:0003061!6.86e-50!102;UBERON:0002193!2.69e-44!112;UBERON:0002371!3.60e-35!80;UBERON:0001474!2.64e-31!86;UBERON:0002405!3.68e-25!115;UBERON:0004765!1.09e-24!101;UBERON:0001434!1.09e-24!101;UBERON:0002384!4.23e-18!375;UBERON:0003081!5.65e-15!216;UBERON:0000178!1.83e-11!15;UBERON:0000179!1.83e-11!15;UBERON:0000463!1.83e-11!15;UBERON:0002204!1.95e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.32e-10;15!UBERON:0000179;1.32e-10;15!UBERON:0000463;1.32e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.79e-63,98;UBERON:0003061,3.79e-63,98;UBERON:0002193,7.09e-56,108;UBERON:0002371,2.54e-53,76;UBERON:0001474,1.77e-48,82;UBERON:0002405,1.98e-45,93;UBERON:0004765,5.09e-43,90;UBERON:0001434,2.01e-37,100;UBERON:0003081,1.48e-23,203;UBERON:0002384,1.09e-19,371;UBERON:0002204,2.53e-17,167;UBERON:0000178,1.20e-10,15;UBERON:0000179,1.20e-10,15;UBERON:0000463,1.20e-10,15;UBERON:0000926,5.88e-10,315;UBERON:0004120,5.88e-10,315;UBERON:0006603,5.88e-10,315 | |||
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|short_description=p7@SRGN | |||
}} | }} |
Latest revision as of 00:16, 19 September 2015
Short description: | p7@SRGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SRGN_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -429bp_to_NM_002727, NR_036430, uc001joz.2_5end |
EntrezGene: | SRGN |
HGNC: | 9361 |
UniProt: | P10124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.79e-63 | 98 |
blood island | 3.79e-63 | 98 |
hemolymphoid system | 7.09e-56 | 108 |
bone marrow | 2.54e-53 | 76 |
bone element | 1.77e-48 | 82 |
immune system | 1.98e-45 | 93 |
skeletal element | 5.09e-43 | 90 |
skeletal system | 2.01e-37 | 100 |
lateral plate mesoderm | 1.48e-23 | 203 |
connective tissue | 1.09e-19 | 371 |
musculoskeletal system | 2.53e-17 | 167 |
blood | 1.20e-10 | 15 |
haemolymphatic fluid | 1.20e-10 | 15 |
organism substance | 1.20e-10 | 15 |
mesoderm | 5.88e-10 | 315 |
mesoderm-derived structure | 5.88e-10 | 315 |
presumptive mesoderm | 5.88e-10 | 315 |