FFCP PHASE1:Hg19::chr8:70744711..70744752,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:70744711..70744752,-
|short_description=p6@SLCO5A1
|description=CAGE_peak_6_at_SLCO5A1_5end
|association_with_transcript=197bp_to_BC139755_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81796 | |EntrezGene=81796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19046 | |HGNC=19046 | ||
|TSSclassifier=strong | |||
|UniProt=A4QPC2 | |UniProt=A4QPC2 | ||
|association_with_transcript=197bp_to_BC139755_5end | |||
|cluster_id=chr8:70744711..70744752,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_6_at_SLCO5A1_5end | |||
|id=chr8:70744711..70744752,- | |||
|ontology_enrichment_celltype=CL:0000039!2.37e-07!7;CL:0000586!2.37e-07!7;CL:0000167!5.75e-07!1;CL:0000164!5.75e-07!1;CL:0000502!5.75e-07!1;CL:0000172!5.75e-07!1;CL:0000173!5.75e-07!1;CL:0002351!5.75e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;7.37e-18;1!CL:0000164;7.37e-18;1!CL:0000502;7.37e-18;1!CL:0000172;7.37e-18;1!CL:0000173;7.37e-18;1!CL:0000333;5.72e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.37e-18,1;CL:0000164,7.37e-18,1;CL:0000502,7.37e-18,1;CL:0000172,7.37e-18,1;CL:0000173,7.37e-18,1;CL:0002351,7.37e-18,1 | |||
|ontology_enrichment_development_v019=CL:0002351;7.37e-18;1 | |||
|ontology_enrichment_disease=DOID:171!7.00e-27!10;DOID:3095!2.48e-23!22;DOID:2994!2.48e-23!22;DOID:1909!1.00e-11!2;DOID:169!6.45e-09!6;DOID:4430!5.75e-07!1;DOID:2355!6.08e-07!1;DOID:630!9.48e-07!1;DOID:0050177!9.48e-07!1;DOID:0050427!9.48e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:171;2.41e-80;10!DOID:3095;1.79e-36;22!DOID:2994;1.79e-36;22!DOID:169;4.52e-25;6!DOID:4430;7.37e-18;1!DOID:2355;7.37e-18;1!DOID:74;1.33e-09;2!DOID:1909;1.33e-09;2!DOID:3193;1.86e-09;2!DOID:962;1.86e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.14e-80,10;DOID:3095,1.70e-36,22;DOID:2994,1.70e-36,22;DOID:169,4.16e-25,6;DOID:4430,7.37e-18,1;DOID:2355,8.72e-18,1;DOID:1909,1.22e-09,2;DOID:74,1.44e-09,2;DOID:3193,1.71e-09,2;DOID:962,1.71e-09,2;DOID:162,1.32e-07,235;DOID:14566,1.99e-07,239;DOID:0050687,7.46e-07,143;DOID:1192,9.64e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.21e-10!8;UBERON:0003135!9.09e-08!11;UBERON:0004177!1.74e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.47e-67;4!UBERON:0000923;3.47e-67;4!UBERON:0010316;3.47e-67;4!UBERON:0005291;3.47e-67;4!UBERON:0002050;7.03e-54;5!UBERON:0005423;7.03e-54;5!UBERON:0000013;5.72e-14;5!UBERON:0002410;5.72e-14;5!UBERON:0003714;1.86e-09;2!UBERON:0000010;3.55e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.36e-14,5;UBERON:0002410,5.36e-14,5;UBERON:0003714,1.71e-09,2;UBERON:0000010,3.42e-08,8 | |||
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|short_description=p6@SLCO5A1 | |||
}} | }} |
Latest revision as of 23:46, 18 September 2015
Short description: | p6@SLCO5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLCO5A1_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 197bp_to_BC139755_5end |
EntrezGene: | SLCO5A1 |
HGNC: | 19046 |
UniProt: | A4QPC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.37e-18 | 1 |
enteroendocrine cell | 7.37e-18 | 1 |
type D enteroendocrine cell | 7.37e-18 | 1 |
somatostatin secreting cell | 7.37e-18 | 1 |
pancreatic D cell | 7.37e-18 | 1 |
progenitor cell of endocrine pancreas | 7.37e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.36e-14 | 5 |
autonomic nervous system | 5.36e-14 | 5 |
neural tissue | 1.71e-09 | 2 |
peripheral nervous system | 3.42e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.14e-80 | 10 |
germ cell and embryonal cancer | 1.70e-36 | 22 |
germ cell cancer | 1.70e-36 | 22 |
neuroendocrine tumor | 4.16e-25 | 6 |
somatostatinoma | 7.37e-18 | 1 |
anemia | 8.72e-18 | 1 |
melanoma | 1.22e-09 | 2 |
hematopoietic system disease | 1.44e-09 | 2 |
peripheral nerve sheath neoplasm | 1.71e-09 | 2 |
neurofibroma | 1.71e-09 | 2 |
cancer | 1.32e-07 | 235 |
disease of cellular proliferation | 1.99e-07 | 239 |
cell type cancer | 7.46e-07 | 143 |
peripheral nervous system neoplasm | 9.64e-07 | 3 |