FFCP PHASE1:Hg19::chrX:107682704..107682722,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1288 | |EntrezGene=1288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2208 | |HGNC=2208 | ||
|TSSclassifier=strong | |||
|UniProt=Q14031,Q9BS57 | |UniProt=Q14031,Q9BS57 | ||
|association_with_transcript=0bp_to_NM_001847,uc004enw.3,uc004eny.2_5end | |association_with_transcript=0bp_to_NM_001847,uc004enw.3,uc004eny.2_5end | ||
|cluster_id=chrX:107682704..107682722,- | |||
|description=CAGE_peak_3_at_COL4A6_5end | |description=CAGE_peak_3_at_COL4A6_5end | ||
|id=chrX:107682704..107682722,- | |id=chrX:107682704..107682722,- | ||
|ontology_enrichment_celltype=CL:0000066!8.49e-18!254;CL:0002076!2.04e-12!43;CL:0000223!2.41e-10!59;CL:0002321!1.37e-08!248;CL:0000220!2.53e-08!246;CL:0002368!2.34e-07!13;CL:0000076!3.00e-07!62;CL:0002159!4.36e-07!13;CL:0002251!4.65e-07!21 | |ontology_enrichment_celltype=CL:0000066!8.49e-18!254;CL:0002076!2.04e-12!43;CL:0000223!2.41e-10!59;CL:0002321!1.37e-08!248;CL:0000220!2.53e-08!246;CL:0002368!2.34e-07!13;CL:0000076!3.00e-07!62;CL:0002159!4.36e-07!13;CL:0002251!4.65e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.51e-17;42!CL:0002368;1.89e-13;13!CL:0002251;2.44e-12;20!CL:0000622;4.38e-11;5!CL:0000154;3.85e-09;6!CL:0002623;6.10e-08;3!CL:0002159;6.45e-08;14!CL:0002202;5.10e-07;9!CL:0002632;5.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.45e-21,42;CL:0000066,2.59e-15,253;CL:0000223,1.00e-14,58;CL:0002368,4.20e-13,13;CL:0002251,2.37e-12,20;CL:0000622,2.66e-11,5;CL:0000154,2.56e-09,6;CL:0002159,2.55e-08,14;CL:0002623,6.17e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;4.08e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.01e-13!169;UBERON:0000925!1.01e-13!169;UBERON:0006595!1.01e-13!169;UBERON:0001004!1.98e-12!72;UBERON:0000922!1.88e-11!612;UBERON:0000481!5.11e-11!347;UBERON:0001007!1.56e-10!155;UBERON:0001555!1.56e-10!155;UBERON:0007026!1.56e-10!155;UBERON:0000467!8.71e-10!625;UBERON:0002050!1.11e-09!605;UBERON:0005423!1.11e-09!605;UBERON:0000480!1.14e-09!626;UBERON:0000477!1.87e-09!286;UBERON:0000468!2.05e-09!659;UBERON:0000923!2.21e-09!604;UBERON:0005291!2.21e-09!604;UBERON:0006598!2.21e-09!604;UBERON:0002532!2.21e-09!604;UBERON:0000065!8.48e-09!53;UBERON:0008947!1.64e-08!38;UBERON:0003258!1.64e-08!38;UBERON:0000077!1.91e-08!130;UBERON:0000062!2.37e-08!511;UBERON:0001048!2.86e-08!168;UBERON:0004921!3.45e-08!129;UBERON:0004185!3.45e-08!129;UBERON:0000064!6.13e-08!219;UBERON:0000483!8.97e-08!309;UBERON:0000161!1.08e-07!35;UBERON:0004121!1.52e-07!169;UBERON:0000119!2.07e-07!312;UBERON:0003104!2.70e-07!238;UBERON:0009142!2.70e-07!238;UBERON:0004111!3.93e-07!241;UBERON:0000924!6.35e-07!173;UBERON:0006601!6.35e-07!173;UBERON:0005156!6.91e-07!59;UBERON:0000990!6.91e-07!59 | |ontology_enrichment_uberon=UBERON:0004119!1.01e-13!169;UBERON:0000925!1.01e-13!169;UBERON:0006595!1.01e-13!169;UBERON:0001004!1.98e-12!72;UBERON:0000922!1.88e-11!612;UBERON:0000481!5.11e-11!347;UBERON:0001007!1.56e-10!155;UBERON:0001555!1.56e-10!155;UBERON:0007026!1.56e-10!155;UBERON:0000467!8.71e-10!625;UBERON:0002050!1.11e-09!605;UBERON:0005423!1.11e-09!605;UBERON:0000480!1.14e-09!626;UBERON:0000477!1.87e-09!286;UBERON:0000468!2.05e-09!659;UBERON:0000923!2.21e-09!604;UBERON:0005291!2.21e-09!604;UBERON:0006598!2.21e-09!604;UBERON:0002532!2.21e-09!604;UBERON:0000065!8.48e-09!53;UBERON:0008947!1.64e-08!38;UBERON:0003258!1.64e-08!38;UBERON:0000077!1.91e-08!130;UBERON:0000062!2.37e-08!511;UBERON:0001048!2.86e-08!168;UBERON:0004921!3.45e-08!129;UBERON:0004185!3.45e-08!129;UBERON:0000064!6.13e-08!219;UBERON:0000483!8.97e-08!309;UBERON:0000161!1.08e-07!35;UBERON:0004121!1.52e-07!169;UBERON:0000119!2.07e-07!312;UBERON:0003104!2.70e-07!238;UBERON:0009142!2.70e-07!238;UBERON:0004111!3.93e-07!241;UBERON:0000924!6.35e-07!173;UBERON:0006601!6.35e-07!173;UBERON:0005156!6.91e-07!59;UBERON:0000990!6.91e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;3.46e-07;19!UBERON:0000166;3.46e-07;19!UBERON:0000486;3.52e-07;12!UBERON:0000365;4.60e-07;5!UBERON:0000065;6.74e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.44e-16,160;UBERON:0000925,8.44e-16,160;UBERON:0006595,8.44e-16,160;UBERON:0001007,5.78e-11,145;UBERON:0001555,5.78e-11,145;UBERON:0007026,5.78e-11,145;UBERON:0001004,8.84e-11,74;UBERON:0000161,7.51e-09,36;UBERON:0004921,2.81e-07,118;UBERON:0000365,3.80e-07,5;UBERON:0002050,4.90e-07,564;UBERON:0000923,9.13e-07,560;UBERON:0010316,9.13e-07,560;UBERON:0005291,9.13e-07,560;UBERON:0006598,9.13e-07,560;UBERON:0010317,9.13e-07,560;UBERON:0002532,9.13e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0.697801167972428,1.96597234917155,1.31883489114227,0,0.662794751455832,0,0,0,0,0,0,0.313454721478088,1.14494394852423,0.821246550437305,0.502170558379211,0.229240217243854,0.410502947249729,0.236132343941038,0,0,0,0.919421224478927,1.204823675113,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.175669571386252,0.523916301990851,1.82147644146271,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,3.05265836499774,0,0.12663051166458,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,2.15585442544872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.36373060295417,1.43402297694502,0.121973706129595,0.132529768321485,0.232387885739037,0.829288440122964,0.252320850875628,0.36497735907583,0,0,0,0,0,1.30137480043828,1.51726221070292,0.241011029883482,0.772057809126758,1.30727666455444,1.18635309555548,0.943819157121151,0.784885860501384,1.53898862778556,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.614942192715568,0,4.82901255797952,3.37205259772859,1.80952150340936,4.62942225792648,0.325808305310325,0,0,1.04337364477569,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,0.992425680696705,2.05984602216551,3.19697332365358,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86040582876998,0.542621605391443,0,0,4.26470338491055,0,5.72734816413214,8.71533458600294,9.69738014465953,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,1.27047312111232,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.909382714338778,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,4.0101294060657,2.11786274552562,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,2.29706215198469,1.95018073810956,0,0,0,0,0,0.107420244868274,0,0,0,5.2891172915513,2.69066094311149,17.2277161867689,1.51736671283325,0,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0.715624433709956,0.372158369359667,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.942499218765491,0,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,0,0,0.75894634753143,0,2.11688647996127,1.34060455107157,1.08890984861323,0,3.01353760869861,0,3.54744122829341,4.59446800413919,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10367830158997,0.296964680832639,2.76444631889309,0,0.140669416410513,0.333926115068718,0,0.211125408127993,0.19924798825107,0,0,0.920418142519393,0.123084805461069,0,0.449341755736634,1.07412704805365,0,2.26879832964947,0,0,0,0.185536196323703,0,0,0.787139999965761,0,0.682760689712998,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,1.23120413606075,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0.889563386041866,0,0,0.741412462787447,0,0,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,0,0.300646838828985,0.311064574191741,0,0.661983911750998,0,0,0,0.138674673013139,0,0.0979923974143777,1.39294730528644,1.7472666824203,0,3.77349692027432,4.60462697642969,3.44884919623479,2.13375836274523,0,0.677942222341597,0,0,0,1.17330829640882,0,2.13452994739353,0,0,0.687219576995494,0,0.576219191952599,0.372757606696298,2.35694034616795,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,2.79282401272254,1.60412296808179,0.717873024576814,1.19807400299395,3.43380838509257,0.669514372325618,1.47803639470798,0,0,0.236349546921671,0.329663433524666,0.337017719270924,0.0984274815147488,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0.394028536495991,0.419636705079985,0,3.5857467866569,0.767660789277781,3.57347663186684,1.98627591109629,0,0.542999601753713,5.18532894720761,3.5924609612035,0,0.082092520749339,0.170388021785422,0,0,0,0,0.13223260174269,0,0.704815022316672,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,1.14681839138014,0.443716206147409,0.18628920882415,0,1.49976489554528,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0.449803112163605,0.310525913752519,2.90294345488599,0.265841714557995,0,0.150257608997218,1.52322084867518,0.813741466409323,0,0.429642228169954,0,0,0,0,0,0,0.192619830407303,0.643324774124777,1.30497145982606,0,0.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| ||
|short_description=p3@COL4A6 | |short_description=p3@COL4A6 | ||
}} | }} |
Latest revision as of 23:32, 18 September 2015
Short description: | p3@COL4A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL4A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001847, uc004enw.3, uc004eny.2_5end |
EntrezGene: | COL4A6 |
HGNC: | 2208 |
UniProt: | Q14031Q9BS57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.45e-21 | 42 |
epithelial cell | 2.59e-15 | 253 |
endodermal cell | 1.00e-14 | 58 |
respiratory epithelial cell | 4.20e-13 | 13 |
epithelial cell of alimentary canal | 2.37e-12 | 20 |
acinar cell | 2.66e-11 | 5 |
protein secreting cell | 2.56e-09 | 6 |
general ecto-epithelial cell | 2.55e-08 | 14 |
acinar cell of salivary gland | 6.17e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.44e-16 | 160 |
endoderm | 8.44e-16 | 160 |
presumptive endoderm | 8.44e-16 | 160 |
digestive system | 5.78e-11 | 145 |
digestive tract | 5.78e-11 | 145 |
primitive gut | 5.78e-11 | 145 |
respiratory system | 8.84e-11 | 74 |
orifice | 7.51e-09 | 36 |
subdivision of digestive tract | 2.81e-07 | 118 |
urothelium | 3.80e-07 | 5 |
embryonic structure | 4.90e-07 | 564 |
germ layer | 9.13e-07 | 560 |
germ layer / neural crest | 9.13e-07 | 560 |
embryonic tissue | 9.13e-07 | 560 |
presumptive structure | 9.13e-07 | 560 |
germ layer / neural crest derived structure | 9.13e-07 | 560 |
epiblast (generic) | 9.13e-07 | 560 |