FFCP PHASE1:Hg19::chr19:47778489..47778503,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255783 | |EntrezGene=255783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27406 | |HGNC=27406 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=315bp_to_BC064510_5end | |association_with_transcript=315bp_to_BC064510_5end | ||
|cluster_id=chr19:47778489..47778503,+ | |||
|coexpression_cluster_id=C248 | |coexpression_cluster_id=C248 | ||
|description=CAGE_peak_4_at_PRR24_5end | |description=CAGE_peak_4_at_PRR24_5end | ||
|id=chr19:47778489..47778503,+ | |id=chr19:47778489..47778503,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.73e-26!42;CL:0000860!8.96e-24!45;CL:0000839!2.06e-18!70;CL:0000557!5.81e-17!71;CL:0002009!2.21e-15!65;CL:0002194!4.35e-15!63;CL:0000576!4.35e-15!63;CL:0000040!4.35e-15!63;CL:0000559!4.35e-15!63;CL:0000766!7.81e-15!76;CL:0000763!4.35e-13!112;CL:0000049!4.35e-13!112;CL:0002031!6.94e-08!124;CL:0000738!2.41e-07!140;CL:0000197!2.82e-07!6;CL:0000098!2.82e-07!6;CL:0002167!2.82e-07!6 | |ontology_enrichment_celltype=CL:0002057!1.73e-26!42;CL:0000860!8.96e-24!45;CL:0000839!2.06e-18!70;CL:0000557!5.81e-17!71;CL:0002009!2.21e-15!65;CL:0002194!4.35e-15!63;CL:0000576!4.35e-15!63;CL:0000040!4.35e-15!63;CL:0000559!4.35e-15!63;CL:0000766!7.81e-15!76;CL:0000763!4.35e-13!112;CL:0000049!4.35e-13!112;CL:0002031!6.94e-08!124;CL:0000738!2.41e-07!140;CL:0000197!2.82e-07!6;CL:0000098!2.82e-07!6;CL:0002167!2.82e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.17e-24;33!CL:0002057;3.17e-24;33!CL:0000473;7.53e-19;39!CL:0000234;7.53e-19;39!CL:0000576;6.41e-17;48!CL:0000766;6.09e-12;69!CL:0000197;3.65e-08;6!CL:0000098;3.65e-08;6!CL:0002167;3.65e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.41e-29,42;CL:0002057,5.41e-29,42;CL:0000473,2.11e-28,48;CL:0000234,2.11e-28,48;CL:0000839,3.34e-26,66;CL:0000557,2.76e-24,67;CL:0000766,9.09e-22,72;CL:0000763,1.68e-21,108;CL:0000049,1.68e-21,108;CL:0002009,2.12e-21,61;CL:0002194,9.54e-21,59;CL:0000576,9.54e-21,59;CL:0000040,9.54e-21,59;CL:0000559,9.54e-21,59;CL:0002031,2.19e-11,120;CL:0002032,5.38e-11,161;CL:0000837,5.38e-11,161;CL:0000738,1.99e-10,136;CL:0000037,4.83e-10,168;CL:0000988,6.07e-09,177;CL:0000197,3.17e-08,6;CL:0000098,3.17e-08,6;CL:0002167,3.17e-08,6;CL:0002087,3.18e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-20;42!CL:0000049;2.02e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.94e-13!80;UBERON:0001474!3.89e-12!86;UBERON:0004765!6.87e-11!101;UBERON:0001434!6.87e-11!101;UBERON:0001737!2.20e-09!9;UBERON:0002193!2.37e-09!112;UBERON:0002390!3.38e-09!102;UBERON:0003061!3.38e-09!102;UBERON:0002405!2.46e-08!115;UBERON:0002204!1.06e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!1.94e-13!80;UBERON:0001474!3.89e-12!86;UBERON:0004765!6.87e-11!101;UBERON:0001434!6.87e-11!101;UBERON:0001737!2.20e-09!9;UBERON:0002193!2.37e-09!112;UBERON:0002390!3.38e-09!102;UBERON:0003061!3.38e-09!102;UBERON:0002405!2.46e-08!115;UBERON:0002204!1.06e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.11e-14;9!UBERON:0001557;3.11e-14;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.76e-20,76;UBERON:0001474,6.53e-18,82;UBERON:0004765,8.92e-18,90;UBERON:0002405,1.48e-15,93;UBERON:0001434,6.38e-15,100;UBERON:0001737,3.63e-14,9;UBERON:0002390,2.47e-13,98;UBERON:0003061,2.47e-13,98;UBERON:0002193,5.47e-12,108;UBERON:0002204,4.70e-11,167;UBERON:0001557,6.21e-07,19 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,3.61616716814386,2.92124036154949,4.39139518911456,0.123121058076788,0,0,0,0,0,0,0,0,0,0,2.63187409637329,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,2.03557534291391,3.77875943688809,3.63876091781724,0.464858073811369,4.93401465626191,8.3620720141678,2.8769239232215,0.768482119587302,1.41889337933151,0.344745680736619,3.87290810150296,1.35426486594342,2.44715041405386,7.09555990150399,2.02251136000576,0.612167784741805,1.60464513538047,5.11469700639233,0.989553900560148,3.39088217956774,1.27867425159808,1.45104619314292,6.24123747160254,1.86846674698672,1.25624332628372,3.12889751052121,5.86409880703815,0,2.20966581592539,1.89877432464531,2.95757400836718,1.70083439972035,2.30624510059213,0.561643155732475,2.85336096398862,0.964353520182481,0,2.18808344918999,3.47061892152804,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,2.63384084775077,0,0,0,3.34372990781356,0,0.946895611469467,0,2.78526142212934,2.3568472597987,1.10766947291811,0.541607727530031,2.17755243533648,1.95089021339817,1.15106533222573,0,2.31842468588042,0.889719378972363,3.74557159325598,1.04535523804977,0.793165398882963,0,0,1.77113784413652,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,3.96373941714944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,1.5189869901714,0,0,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0,0.132529768321485,0,0,2.77552935963191,0,0,0,0,0,0,1.41968160047813,5.39471008249925,4.57920956778616,1.43382164552112,4.13970943775572,2.37270619111097,1.21348177344148,1.96221465125346,4.23221872641029,0.738155454624648,0,0,0,0,0,0,0,0,2.05881372358231,0,0,0,0,0,0,0,2.31860809950154,3.05262605013136,0.288732895522148,0.925971025153221,1.33177906564219,0,0,0,0,0,0,2.51973192298289,4.11147782002921,0,0,0,0,2.64145302039678,1.24396869324463,1.72943944100354,1.64115163454294,1.96843472305724,0,0,0,0.102827492703324,0,4.28739648945867,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0,2.43247561282381,9.04062764577828,0,0,0,5.70547620162874,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,5.8231841228626,6.0665856191035,6.62350143142526,6.09135357962109,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,2.76231551918512,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,1.31555925987561,2.61435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0.765676274967505,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,4.59126326432643,0,0,0,1.29070216983646,3.04572027140676,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27235358192189,0,0,0,0,3.04725200042886,0,0,0,0,0,0,0,0,0,0,3.2454681417118,0,1.4098700508785,0.18714054040822,0,0,0,0,2.62618933211459,0.890894042497916,0,7.95318118213038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,4.42870692906919,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,2.87101043758728,1.83195186803725,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0,10.2071449080664,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,5.56660782866512,0,0.803765742325096,2.61324929534744,6.64704540846696,3.82455615637551,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,1.68067843270016,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,4.43034089983493,1.22026264901963,0,6.30750115259078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.899606224327209,0,0.829412415681711,0,3.1304703708704,0,4.56966254602554,0,0,0,7.88857391793439,1.19428766609585,0,3.77735275701072,3.70424437642511,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,1.7537427795545,2.65729680626726,6.86974655874546,0,0,0,0,0,0,0,0.184105950251841,1.81843360035278,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,4.25089728976755,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,1.56215619722769,0,0,0,0,0,0,0,0.535701835878287,0,4.85572483389305,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,5.27350855629344,0,0.111855431797792,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,1.9630846711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| ||
|short_description=p4@PRR24 | |short_description=p4@PRR24 | ||
}} | }} |
Latest revision as of 23:12, 18 September 2015
Short description: | p4@PRR24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRR24_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | 315bp_to_BC064510_5end |
EntrezGene: | PRR24 |
HGNC: | 27406 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.41e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.41e-29 | 42 |
defensive cell | 2.11e-28 | 48 |
phagocyte | 2.11e-28 | 48 |
myeloid lineage restricted progenitor cell | 3.34e-26 | 66 |
granulocyte monocyte progenitor cell | 2.76e-24 | 67 |
myeloid leukocyte | 9.09e-22 | 72 |
myeloid cell | 1.68e-21 | 108 |
common myeloid progenitor | 1.68e-21 | 108 |
macrophage dendritic cell progenitor | 2.12e-21 | 61 |
monopoietic cell | 9.54e-21 | 59 |
monocyte | 9.54e-21 | 59 |
monoblast | 9.54e-21 | 59 |
promonocyte | 9.54e-21 | 59 |
hematopoietic lineage restricted progenitor cell | 2.19e-11 | 120 |
hematopoietic oligopotent progenitor cell | 5.38e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.38e-11 | 161 |
leukocyte | 1.99e-10 | 136 |
hematopoietic stem cell | 4.83e-10 | 168 |
hematopoietic cell | 6.07e-09 | 177 |
receptor cell | 3.17e-08 | 6 |
sensory epithelial cell | 3.17e-08 | 6 |
olfactory epithelial cell | 3.17e-08 | 6 |
nongranular leukocyte | 3.18e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.76e-20 | 76 |
bone element | 6.53e-18 | 82 |
skeletal element | 8.92e-18 | 90 |
immune system | 1.48e-15 | 93 |
skeletal system | 6.38e-15 | 100 |
larynx | 3.63e-14 | 9 |
hematopoietic system | 2.47e-13 | 98 |
blood island | 2.47e-13 | 98 |
hemolymphoid system | 5.47e-12 | 108 |
musculoskeletal system | 4.70e-11 | 167 |
upper respiratory tract | 6.21e-07 | 19 |