FFCP PHASE1:Hg19::chr21:47549257..47549279,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1292 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2212 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-463bp_to_uc010gqe.1_5end | |||
|cluster_id=chr21:47549257..47549279,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_44_at_COL6A2_5end | |||
|id=chr21:47549257..47549279,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.04e-21!180;CL:0000057!7.61e-15!75;CL:0000048!3.30e-10!430;CL:0000723!1.54e-09!436;CL:0000034!5.67e-09!444;CL:0000187!6.11e-09!54;CL:0000183!8.87e-09!59;CL:0000680!9.01e-09!57;CL:0000056!9.01e-09!57;CL:0000355!9.01e-09!57;CL:0000393!2.13e-08!60;CL:0000211!2.13e-08!60;CL:0000499!2.36e-08!27;CL:0000192!6.31e-08!42;CL:0000514!6.31e-08!42;CL:0002570!1.76e-07!8;CL:0002334!5.59e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000135;9.98e-13;3!CL:0000388;9.98e-13;3!CL:0002334;2.28e-10;12!CL:0002561;2.16e-08;2!CL:0002583;5.18e-08;2!CL:0002559;1.89e-07;5!CL:0000499;2.21e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.11e-12,3;CL:0000388,1.11e-12,3;CL:0000057,2.30e-12,76;CL:0002334,2.83e-10,12;CL:0002561,1.44e-08,2;CL:0002583,4.84e-08,2;CL:0002559,1.49e-07,5;CL:0000499,2.71e-07,28;CL:0000048,3.36e-07,427;CL:0000723,5.79e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.84e-09!83;UBERON:0002329!1.84e-09!83;UBERON:0003077!1.84e-09!83;UBERON:0003059!1.84e-09!83;UBERON:0007282!1.84e-09!83;UBERON:0009618!1.84e-09!83;UBERON:0007285!1.84e-09!83;UBERON:0002385!1.04e-08!63;UBERON:0001015!1.04e-08!63;UBERON:0000383!1.04e-08!63;UBERON:0001013!1.79e-08!14;UBERON:0004290!2.82e-08!70;UBERON:0001134!4.45e-08!61;UBERON:0002036!4.45e-08!61;UBERON:0003082!4.45e-08!61;UBERON:0000486!2.40e-07!82;UBERON:0005256!8.42e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.98e-13;3!UBERON:0000043;9.98e-13;3!UBERON:0007845;9.98e-13;3!UBERON:0004457;4.61e-10;9!UBERON:0000042;4.61e-10;9!UBERON:0005933;2.16e-08;2!UBERON:0005942;2.16e-08;2!UBERON:0005932;2.16e-08;2!UBERON:0004905;8.32e-08;8!UBERON:0000982;8.32e-08;8!UBERON:0004770;8.32e-08;8!UBERON:0002073;1.89e-07;5!UBERON:0002072;4.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.11e-12,3;UBERON:0000043,1.11e-12,3;UBERON:0007845,1.11e-12,3;UBERON:0005933,1.44e-08,2;UBERON:0005942,1.44e-08,2;UBERON:0005932,1.44e-08,2;UBERON:0004905,8.59e-08,8;UBERON:0000982,8.59e-08,8;UBERON:0004770,8.59e-08,8;UBERON:0002073,1.49e-07,5;UBERON:0005086,1.49e-07,5;UBERON:0004457,2.89e-07,12;UBERON:0000042,2.89e-07,12;UBERON:0002199,3.22e-07,46;UBERON:0002416,3.22e-07,46;UBERON:0002072,3.87e-07,5 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.26858963686374,1.0007329835313,0.446961094427288,1.74467704820074,2.53299878168311,0,0.522371256399677,0,0,0,0,0.37129905888014,1.32558950291166,4.03395087871065,1.80808358407193,1.46062018077475,2.43966399395253,0,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.724232594804119,0.795285947051099,0.973269740605272,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.397227542439656,1.43418310374407,0.354668382198357,0,0,0.98667019366864,0,0,0.326923806226917,0.151357427644931,0,0,0,0,1.04614076386261,0.117434498643765,0.161872944368132,0,0.408308342509787,0.245668634623536,0.413303124703062,0,1.97813543422845,0,1.43723628363248,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0.751190294532984,0.113432183160021,0.179389635688862,1.06778694409284,0,0.900273288253207,0.515262646192195,1.03056216018252,0.18611685633159,0.675105328965065,0.68205903612839,0.504867548488229,0.736399189138395,1.61646056818812,0,0,1.01736355386293,0,0,0,0,0,0,0.10366105501537,0,0,0,8.36213219650751,0,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,3.57656445851882,0.845302752556,0,0,0.514414748524284,1.41849132023278,0,0.714889968290738,2.17048642156577,0,0.977208552881205,1.06617584622764,0.791951872933429,0,0,0.199945982364114,0,0,0,0.718874566474748,1.14861935834114,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.736148950314839,2.00068208423871,0.542530047399471,1.24782516918484,0.892144943985809,0.473107245101804,0.117141414992713,0.300946099727719,0,3.10419213877515,0.664225598535437,0.184369168541703,0.695068915744663,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,1.12264037773229,0.256278298511402,1.02341449813341,0.804269605718038,0,1.3878872442239,1.24293207719189,0.246381468041427,2.59627214591811,2.78904908303902,0,0,0,0.34444334449382,1.27463817604702,0.786746489756545,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.48335359146061,0.308097234229289,0.614014698904518,0,0,0.725083469571143,0.170453254832202,0.445160178233687,0,0,0,0,0,0.62962469366128,0,0,0,0,0.37064843820784,0,0,0,0.38126038784765,0,0.42793898803392,0.95460974377781,0,0.539617372749944,1.92175920815238,0.589062011728432,0,0,0,0.48763373908959,0.731140468893853,2.11300293513511,0.272999822815972,0.565621727814851,1.13008116620243,0,1.99031692572366,0.876901770507525,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.687743287091848,0,0.709522128141196,3.16661452946496,2.30506425071931,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0.394573622547734,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0.227884111694002,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0.343972064943233,0,0,0,0.581934098930517,0.0882561266915003,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0.446342914883745,0,0.360299883542404,0,0,0,0,0,0,0,0,0.643012593860077,0,0,0,0,0,0,0,0.0524545881349981,0.422401346077626,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0,0.339936274560377,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.447764408660622,0.701139929541673,0.554805861502613,0.378806010550178,0.754703705257725,1.77962244319307,0.228840068396924,0.604923695052956,0.466311601748341,0.295710299979268,0.318593534327405,0.449803112163605,0.155262956876259,0.829412415681711,0.265841714557995,0.521745061811734,0.150257608997218,0.761610424337591,0,0.909243296012797,0,0.464033759878494,0.796191777397232,0,2.06037423109676,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.247871528518004,0,0.636008701306837,0,0,1.05802783107205,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283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| |||
|short_description=p44@COL6A2 | |||
}} |
Latest revision as of 23:09, 18 September 2015
Short description: | p44@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_44_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -463bp_to_uc010gqe.1_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.11e-12 | 3 |
tendon cell | 1.11e-12 | 3 |
fibroblast | 2.30e-12 | 76 |
preadipocyte | 2.83e-10 | 12 |
outer root sheath cell | 1.44e-08 | 2 |
subcutaneous preadipocyte | 4.84e-08 | 2 |
hair follicle cell | 1.49e-07 | 5 |
stromal cell | 2.71e-07 | 28 |
multi fate stem cell | 3.36e-07 | 427 |
somatic stem cell | 5.79e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.11e-12 | 3 |
tendon | 1.11e-12 | 3 |
regular connective tissue | 1.11e-12 | 3 |
hair root sheath | 1.44e-08 | 2 |
hair outer root sheath | 1.44e-08 | 2 |
bulb of hair follicle | 1.44e-08 | 2 |
articulation | 8.59e-08 | 8 |
skeletal joint | 8.59e-08 | 8 |
articular system | 8.59e-08 | 8 |
hair follicle | 1.49e-07 | 5 |
hair follicle placode | 1.49e-07 | 5 |
cavity lining | 2.89e-07 | 12 |
serous membrane | 2.89e-07 | 12 |
integument | 3.22e-07 | 46 |
integumental system | 3.22e-07 | 46 |
hypodermis | 3.87e-07 | 5 |