FFCP PHASE1:Hg19::chr11:63273811..63273822,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85329 | |EntrezGene=85329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15788 | |HGNC=15788 | ||
|TSSclassifier=strong | |||
|UniProt=G5E970 | |UniProt=G5E970 | ||
|association_with_transcript=-12bp_to_ENST00000340246_5end | |association_with_transcript=-12bp_to_ENST00000340246_5end | ||
|cluster_id=chr11:63273811..63273822,+ | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_6_at_LGALS12_5end | |description=CAGE_peak_6_at_LGALS12_5end | ||
|id=chr11:63273811..63273822,+ | |id=chr11:63273811..63273822,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.02e-55!15;CL:0000325!4.55e-24!39;CL:0002615!2.84e-22!3;CL:0002521!3.05e-22!3 | |ontology_enrichment_celltype=CL:0000136!1.02e-55!15;CL:0000325!4.55e-24!39;CL:0002615!2.84e-22!3;CL:0002521!3.05e-22!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;6.82e-111;13!CL:0002615;1.65e-54;3!CL:0002521;2.99e-25;3!CL:0002617;1.57e-10;2!CL:0000775;2.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.65e-96,15;CL:0002615,2.17e-54,3;CL:0002521,2.99e-25,3;CL:0002617,1.57e-10,2;CL:0000775,2.32e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:225!5.82e-08!1 | |ontology_enrichment_disease=DOID:225!5.82e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002190!3.05e-22!3;UBERON:0002072!1.42e-13!5;UBERON:0003688!2.07e-11!6;UBERON:0002358!2.07e-11!6;UBERON:0003684!2.07e-11!6;UBERON:0001178!2.07e-11!6;UBERON:0007029!1.63e-08!1;UBERON:0001831!2.50e-08!1;UBERON:0001567!2.50e-08!1;UBERON:0008801!2.50e-08!1;UBERON:0000989!2.69e-08!1;UBERON:0008811!2.69e-08!1;UBERON:0006258!2.69e-08!1;UBERON:0005876!2.69e-08!1;UBERON:0004874!2.69e-08!1;UBERON:0001154!3.57e-08!1;UBERON:0001153!3.57e-08!1 | |ontology_enrichment_uberon=UBERON:0002190!3.05e-22!3;UBERON:0002072!1.42e-13!5;UBERON:0003688!2.07e-11!6;UBERON:0002358!2.07e-11!6;UBERON:0003684!2.07e-11!6;UBERON:0001178!2.07e-11!6;UBERON:0007029!1.63e-08!1;UBERON:0001831!2.50e-08!1;UBERON:0001567!2.50e-08!1;UBERON:0008801!2.50e-08!1;UBERON:0000989!2.69e-08!1;UBERON:0008811!2.69e-08!1;UBERON:0006258!2.69e-08!1;UBERON:0005876!2.69e-08!1;UBERON:0004874!2.69e-08!1;UBERON:0001154!3.57e-08!1;UBERON:0001153!3.57e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.07e-27;6!UBERON:0002358;1.07e-27;6!UBERON:0003684;1.07e-27;6!UBERON:0001178;1.07e-27;6!UBERON:0002190;2.99e-25;3!UBERON:0007029;4.28e-19;1!UBERON:0004457;1.01e-18;9!UBERON:0000042;1.01e-18;9!UBERON:0002072;1.40e-15;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.23e-27,6;UBERON:0002358,1.23e-27,6;UBERON:0003684,1.23e-27,6;UBERON:0001178,1.23e-27,6;UBERON:0002190,2.99e-25,3;UBERON:0007029,3.25e-19,1;UBERON:0002072,1.40e-15,5;UBERON:0004457,3.45e-14,12;UBERON:0000042,3.45e-14,12 | |||
|phase1_expression=0,12.203729861786,3.80576891059122,1.0007329835313,7.59833860526389,0,17.7309914717817,0.631719873426831,2.61185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,1.0027595760908,0.612691153526923,2.29510841496863,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,12.203729861786,3.80576891059122,1.0007329835313,7.59833860526389,0,17.7309914717817,0.631719873426831,2.61185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,1.0027595760908,0.612691153526923,2.29510841496863,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p6@LGALS12 | |short_description=p6@LGALS12 | ||
}} | }} |
Latest revision as of 23:03, 18 September 2015
Short description: | p6@LGALS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LGALS12_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | -12bp_to_ENST00000340246_5end |
EntrezGene: | LGALS12 |
HGNC: | 15788 |
UniProt: | G5E970 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.65e-96 | 15 |
adipocyte of omentum tissue | 2.17e-54 | 3 |
subcutaneous fat cell | 2.99e-25 | 3 |
adipocyte of breast | 1.57e-10 | 2 |
neutrophil | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.23e-27 | 6 |
peritoneum | 1.23e-27 | 6 |
abdominal cavity | 1.23e-27 | 6 |
visceral peritoneum | 1.23e-27 | 6 |
subcutaneous adipose tissue | 2.99e-25 | 3 |
surface | 3.25e-19 | 1 |
hypodermis | 1.40e-15 | 5 |
cavity lining | 3.45e-14 | 12 |
serous membrane | 3.45e-14 | 12 |