FFCP PHASE1:Hg19::chr6:43746193..43746214,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7422 | |EntrezGene=7422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12680 | |HGNC=12680 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=284bp_to_ENST00000493786_5end | |association_with_transcript=284bp_to_ENST00000493786_5end | ||
|cluster_id=chr6:43746193..43746214,+ | |||
|coexpression_cluster_id=C356 | |coexpression_cluster_id=C356 | ||
|description=CAGE_peak_6_at_VEGFA_5end | |description=CAGE_peak_6_at_VEGFA_5end | ||
|id=chr6:43746193..43746214,+ | |id=chr6:43746193..43746214,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.86e-08;33!CL:0002057;3.86e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.99e-07,42;CL:0002057,1.99e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!7.36e-09!29;DOID:120!1.12e-08!27;DOID:2394!1.25e-08!14 | |ontology_enrichment_disease=DOID:193!7.36e-09!29;DOID:120!1.12e-08!27;DOID:2394!1.25e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.17e-15;14!DOID:193;2.01e-11;29!DOID:120;5.79e-11;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.26e-16,14;DOID:193,1.04e-11,29;DOID:120,3.90e-11,27 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;5.38e-09;5!UBERON:0000992;2.63e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,5.66e-09,5;UBERON:0000992,2.48e-07,13 | |||
|phase1_expression=0,1.71280419112787,0.845726424575827,0,0.446961094427288,0,0,0,0.261185628199839,1.22866968250754,0,0,0,0.37129905888014,0.331397375727916,1.34465029290355,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0,0,0.382067028739756,0.410502947249729,0.157421562627358,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0,0.0774672005803016,0.284338464974843,0,0.553995408531877,2.4065333696417,0.868043482863407,0,0,0,0.581592955118259,0.755751887377619,0,1.39457422143411,2.05583944010913,1.54853185447552,0.575384784644301,0.768482119587302,0.236482229888585,0.689491361473237,1.93645405075148,4.06279459783025,3.9530891303947,2.72906150057846,1.79778787556068,5.81559395504715,1.60464513538047,3.83602275479425,0,0.398927315243264,0,2.61188314765726,3.40431134814684,0.622822248995575,1.00499466102697,1.0429658368404,0.217188844705117,0,0.368277635987565,0.632924774881769,0.422510572623884,0,0,0.336985893439485,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,2.00535164254356,0.289693037921647,0.795285947051099,3.40644409211845,0,0.221729397462564,0.263504357079378,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0.436094052142534,2.48485975847659,0,1.32409180813219,1.14734648299525,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0,0.151357427644931,0,0.70296429550139,1.24864030732128,0,0,0.587172493218824,0.809364721840658,0.140450806702248,0,0.61417158655884,0.619954687054593,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0.438977620880838,0.919463387397059,0.901428353439581,0.113432183160021,1.07633781413317,1.06778694409284,1.05965950579781,0,0,1.03056216018252,0.18611685633159,0.506328996723799,0.779496041289589,1.26216887122057,0.276149695926898,0.323292113637624,0.710019185033229,0.201504196455281,0.339121184620975,0.193260853163297,0.545492241181669,0.286804595389004,0,0.265059536642971,0.464775771478074,0.310983165046111,0,0,0,0,0,0,0,0.591534000199219,0,0.241011029883482,0.882351781859152,0.435758888184812,0.474541238222193,0.674156540800822,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0.439001141634502,0,0.402115889646523,0.277765335475589,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0.716468181622786,1.16253575405585,0,0,0.176096868026452,0.829312462163088,0.144119953416961,0.75745460055828,0,0,1.17217447210047,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,1.00084595560703,0,0,0,0.710783897485092,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0.197030760201927,0,0,0.76228387266739,1.30139853857622,1.54657762555539,0,0,0.749007023947182,0,0.414415513436035,0,0,0.271265023699736,0.415941723061614,1.60586089917446,1.10391690523754,0.702848489956279,0,0,0,0,0.184369168541703,0.347534457872331,0.195801157462741,0.343143423810856,0.206768026122887,0.862856803274467,0.74709290462411,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,1.28139149255701,0.511707249066704,0.64341568457443,0,1.69630663182921,0.710246901252508,0.328508624055237,2.07701771673448,0.697262270759755,0.120859449591622,0.601519410909855,1.47329582297434,0,0.182091168006717,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0.422206515571503,0,0.170093705276516,0,0,0,0,0.254876273045038,1.66215201785745,0.895499018888713,0,0,0,0,0.976135183992909,0.103041011647722,0.457847324091717,0.165018999841176,0,1.30012049207304,0,0.870036464629098,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0.435050081742686,0.340906509664404,0.0890320356467374,2.14870389969272,1.15314040419064,1.91419068741876,1.51736671283325,0.464845549297286,6.61105928344344,0,0,1.06461206063404,0.869932992075073,0.37064843820784,1.43124886741991,0,0,0.38126038784765,0.255897791311334,0,0,3.92474320099615,0,0.274537029736055,0,0.202182481573316,0,1.68503382495592,0,0.731140468893853,4.22600587027022,0.136499911407986,0.565621727814851,2.26016233240486,0,0,3.5076070820301,0,0,0,0,0,0,0.0982490410131212,0.7133421029625,0,0.211107635297664,0.658589785919804,0,0,0.48111056362756,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.213425530045242,0,0,0,0.846694330895531,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0.390776190804081,0,0,0.540911356951966,0,0,0.37428108081644,0.439524537815682,0.121360521749513,0,0.284136146806413,0.23874448473769,0,2.15012491469462,0,0.281338832821026,0.667852230137435,0,0.63337622438398,0.996239941255349,0,0.503865495708552,0.102268682502155,0.861593638227486,0.622079175323615,0.269605053441981,0.895105873378046,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.087459999996195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| ||
|short_description=p6@VEGFA | |short_description=p6@VEGFA | ||
}} | }} |
Latest revision as of 23:01, 18 September 2015
Short description: | p6@VEGFA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VEGFA_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | 284bp_to_ENST00000493786_5end |
EntrezGene: | VEGFA |
HGNC: | 12680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.99e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.99e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
right ovary | 5.66e-09 | 5 |
female gonad | 2.48e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.26e-16 | 14 |
reproductive organ cancer | 1.04e-11 | 29 |
female reproductive organ cancer | 3.90e-11 | 27 |