FFCP PHASE1:Hg19::chr15:72668805..72668860,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3073 | |EntrezGene=3073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4878 | |HGNC=4878 | ||
|TSSclassifier=strong | |||
|UniProt=P06865 | |UniProt=P06865 | ||
|association_with_transcript=0bp_to_ENST00000268097_5end | |association_with_transcript=0bp_to_ENST00000268097_5end | ||
|cluster_id=chr15:72668805..72668860,- | |||
|coexpression_cluster_id=C1631 | |||
|description=CAGE_peak_4_at_HEXA_5end | |description=CAGE_peak_4_at_HEXA_5end | ||
|id=chr15:72668805..72668860,- | |id=chr15:72668805..72668860,- | ||
|ontology_enrichment_celltype=CL:0000557!1.48e-25!71;CL:0000766!1.95e-25!76;CL:0000839!5.51e-25!70;CL:0002194!9.87e-24!63;CL:0000576!9.87e-24!63;CL:0000040!9.87e-24!63;CL:0000559!9.87e-24!63;CL:0002009!1.14e-22!65;CL:0002057!2.17e-19!42;CL:0000048!3.88e-17!430;CL:0000860!7.55e-17!45;CL:0000723!6.80e-16!436;CL:0000034!6.40e-15!444;CL:0002031!1.04e-13!124;CL:0000738!1.97e-13!140;CL:0002087!5.26e-13!119;CL:0000763!5.49e-13!112;CL:0000049!5.49e-13!112;CL:0000134!1.37e-12!358;CL:0002320!2.75e-11!365;CL:0000219!2.80e-10!390;CL:0002371!4.33e-09!591;CL:0000037!1.15e-08!172;CL:0000566!1.15e-08!172;CL:0002032!2.37e-08!165;CL:0000837!2.37e-08!165;CL:0000988!4.96e-08!182;CL:0000144!3.33e-07!625 | |ontology_enrichment_celltype=CL:0000557!1.48e-25!71;CL:0000766!1.95e-25!76;CL:0000839!5.51e-25!70;CL:0002194!9.87e-24!63;CL:0000576!9.87e-24!63;CL:0000040!9.87e-24!63;CL:0000559!9.87e-24!63;CL:0002009!1.14e-22!65;CL:0002057!2.17e-19!42;CL:0000048!3.88e-17!430;CL:0000860!7.55e-17!45;CL:0000723!6.80e-16!436;CL:0000034!6.40e-15!444;CL:0002031!1.04e-13!124;CL:0000738!1.97e-13!140;CL:0002087!5.26e-13!119;CL:0000763!5.49e-13!112;CL:0000049!5.49e-13!112;CL:0000134!1.37e-12!358;CL:0002320!2.75e-11!365;CL:0000219!2.80e-10!390;CL:0002371!4.33e-09!591;CL:0000037!1.15e-08!172;CL:0000566!1.15e-08!172;CL:0002032!2.37e-08!165;CL:0000837!2.37e-08!165;CL:0000988!4.96e-08!182;CL:0000144!3.33e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.14e-22;39!CL:0000234;3.14e-22;39!CL:0000860;6.96e-21;33!CL:0002057;6.96e-21;33!CL:0000576;2.90e-17;48!CL:0000766;8.07e-16;69!CL:0000235;4.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.51e-35,72;CL:0000557,2.30e-33,67;CL:0000839,2.99e-33,66;CL:0002194,2.64e-31,59;CL:0000576,2.64e-31,59;CL:0000040,2.64e-31,59;CL:0000559,2.64e-31,59;CL:0000473,3.34e-30,48;CL:0000234,3.34e-30,48;CL:0002009,1.71e-29,61;CL:0000860,8.58e-25,42;CL:0002057,8.58e-25,42;CL:0000048,2.70e-19,427;CL:0000738,2.92e-19,136;CL:0002031,9.53e-19,120;CL:0000763,1.68e-18,108;CL:0000049,1.68e-18,108;CL:0000723,3.59e-18,433;CL:0002087,4.54e-18,115;CL:0000034,4.02e-17,441;CL:0000134,1.96e-16,354;CL:0000219,7.94e-16,386;CL:0002320,3.83e-15,361;CL:0000037,5.58e-13,168;CL:0002032,8.30e-13,161;CL:0000837,8.30e-13,161;CL:0000988,2.01e-11,177;CL:0000235,5.11e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.31e-26!112;UBERON:0002390!3.52e-25!102;UBERON:0003061!3.52e-25!102;UBERON:0002371!1.07e-24!80;UBERON:0003081!4.48e-23!216;UBERON:0001474!8.44e-21!86;UBERON:0002204!2.54e-20!167;UBERON:0002405!3.87e-18!115;UBERON:0004765!3.08e-17!101;UBERON:0001434!3.08e-17!101;UBERON:0002384!2.40e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-31,76;UBERON:0002390,1.77e-30,98;UBERON:0003061,1.77e-30,98;UBERON:0002193,2.29e-30,108;UBERON:0002405,3.23e-29,93;UBERON:0001474,2.85e-27,82;UBERON:0003081,9.04e-25,203;UBERON:0004765,1.70e-22,90;UBERON:0000926,4.37e-20,315;UBERON:0004120,4.37e-20,315;UBERON:0006603,4.37e-20,315;UBERON:0001434,7.51e-20,100;UBERON:0002204,3.78e-19,167;UBERON:0002384,9.47e-15,371 | |||
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| ||
|short_description=p4@HEXA | |short_description=p4@HEXA | ||
}} | }} |
Latest revision as of 23:01, 18 September 2015
Short description: | p4@HEXA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HEXA_5end |
Coexpression cluster: | C1631_Monocytederived_Melanocyte_CD14_Macrophage_Mast_Mesenchymal_Fibroblast |
Association with transcript: | 0bp_to_ENST00000268097_5end |
EntrezGene: | HEXA |
HGNC: | 4878 |
UniProt: | P06865 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.51e-35 | 72 |
granulocyte monocyte progenitor cell | 2.30e-33 | 67 |
myeloid lineage restricted progenitor cell | 2.99e-33 | 66 |
monopoietic cell | 2.64e-31 | 59 |
monocyte | 2.64e-31 | 59 |
monoblast | 2.64e-31 | 59 |
promonocyte | 2.64e-31 | 59 |
defensive cell | 3.34e-30 | 48 |
phagocyte | 3.34e-30 | 48 |
macrophage dendritic cell progenitor | 1.71e-29 | 61 |
classical monocyte | 8.58e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.58e-25 | 42 |
multi fate stem cell | 2.70e-19 | 427 |
leukocyte | 2.92e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 9.53e-19 | 120 |
myeloid cell | 1.68e-18 | 108 |
common myeloid progenitor | 1.68e-18 | 108 |
somatic stem cell | 3.59e-18 | 433 |
nongranular leukocyte | 4.54e-18 | 115 |
stem cell | 4.02e-17 | 441 |
mesenchymal cell | 1.96e-16 | 354 |
motile cell | 7.94e-16 | 386 |
connective tissue cell | 3.83e-15 | 361 |
hematopoietic stem cell | 5.58e-13 | 168 |
hematopoietic oligopotent progenitor cell | 8.30e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.30e-13 | 161 |
hematopoietic cell | 2.01e-11 | 177 |
macrophage | 5.11e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.36e-31 | 76 |
hematopoietic system | 1.77e-30 | 98 |
blood island | 1.77e-30 | 98 |
hemolymphoid system | 2.29e-30 | 108 |
immune system | 3.23e-29 | 93 |
bone element | 2.85e-27 | 82 |
lateral plate mesoderm | 9.04e-25 | 203 |
skeletal element | 1.70e-22 | 90 |
mesoderm | 4.37e-20 | 315 |
mesoderm-derived structure | 4.37e-20 | 315 |
presumptive mesoderm | 4.37e-20 | 315 |
skeletal system | 7.51e-20 | 100 |
musculoskeletal system | 3.78e-19 | 167 |
connective tissue | 9.47e-15 | 371 |