FFCP PHASE1:Hg19::chr14:107114267..107114277,-: Difference between revisions
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|id=chr14:107114267..107114277,-
|short_description=p1@IGHV3-64
|description=CAGE_peak_1_at_IGHV3-64_5end
|association_with_transcript=0bp_to_ENST00000454421_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100134256 | |EntrezGene=100134256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5617 | |HGNC=5617 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000454421_5end | |||
|cluster_id=chr14:107114267..107114277,- | |||
|description=CAGE_peak_1_at_IGHV3-64_5end | |||
|id=chr14:107114267..107114277,- | |||
|ontology_enrichment_celltype=CL:0000236!2.96e-16!14;CL:0000945!1.92e-13!24;CL:0000826!1.92e-13!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.32e-26;13!CL:0000945;1.39e-13;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,8.54e-24,14;CL:0000945,1.51e-13,24;CL:0000826,1.51e-13,24 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.36e-08;1!UBERON:0008801;1.36e-08;1!UBERON:0006242;2.33e-08;1!UBERON:0009143;3.10e-08;1!UBERON:0001045;5.24e-08;1!UBERON:0006595;2.69e-07;86 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.58e-28!115;UBERON:0001829!5.85e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.77e-15;2!UBERON:0004921;1.58e-13;33!UBERON:0001044;2.93e-11;6!UBERON:0003293;2.93e-11;6!UBERON:0003294;2.93e-11;6!UBERON:0010047;2.93e-11;6!UBERON:0003408;2.93e-11;6!UBERON:0000167;2.93e-11;6!UBERON:0002372;1.13e-08;1!UBERON:0001961;1.13e-08;1!UBERON:0001744;1.13e-08;1!UBERON:0001042;1.13e-08;1!UBERON:0001735;1.13e-08;1!UBERON:0001831;1.36e-08;1!UBERON:0001736;1.36e-08;1!UBERON:0001567;1.36e-08;1!UBERON:0000029;1.95e-08;1!UBERON:0001041;3.00e-08;14!UBERON:0001154;5.24e-08;1!UBERON:0001153;5.24e-08;1!UBERON:0009854;5.24e-08;1!UBERON:0001155;2.73e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.46e-20,114;UBERON:0001829,1.77e-15,2;UBERON:0001044,3.14e-11,6;UBERON:0003293,3.14e-11,6;UBERON:0003294,3.14e-11,6;UBERON:0010047,3.14e-11,6;UBERON:0000167,3.14e-11,6;UBERON:0002372,1.13e-08,1;UBERON:0001961,1.13e-08,1;UBERON:0001744,1.13e-08,1;UBERON:0001735,1.13e-08,1;UBERON:0001736,1.31e-08,1;UBERON:0006298,1.31e-08,1;UBERON:0001831,1.41e-08,1;UBERON:0001567,1.41e-08,1;UBERON:0008801,1.41e-08,1;UBERON:0000029,1.88e-08,1;UBERON:0001154,4.41e-08,1;UBERON:0001153,4.41e-08,1;UBERON:0001045,4.41e-08,1;UBERON:0001155,2.50e-07,9;UBERON:0003408,6.44e-07,10 | |||
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| ||
|short_description=p1@IGHV3-64 | |||
}} | }} |
Latest revision as of 22:53, 18 September 2015
Short description: | p1@IGHV3-64 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV3-64_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000454421_5end |
EntrezGene: | LOC100134256 |
HGNC: | 5617 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 8.54e-24 | 14 |
lymphocyte of B lineage | 1.51e-13 | 24 |
pro-B cell | 1.51e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.46e-20 | 114 |
major salivary gland | 1.77e-15 | 2 |
saliva-secreting gland | 3.14e-11 | 6 |
gland of oral region | 3.14e-11 | 6 |
gland of foregut | 3.14e-11 | 6 |
oral gland | 3.14e-11 | 6 |
oral cavity | 3.14e-11 | 6 |
tonsil | 1.13e-08 | 1 |
mucosa-associated lymphoid tissue | 1.13e-08 | 1 |
lymphoid tissue | 1.13e-08 | 1 |
tonsillar ring | 1.13e-08 | 1 |
submandibular gland | 1.31e-08 | 1 |
submandibular gland primordium | 1.31e-08 | 1 |
parotid gland | 1.41e-08 | 1 |
cheek | 1.41e-08 | 1 |
parotid gland primordium | 1.41e-08 | 1 |
lymph node | 1.88e-08 | 1 |
vermiform appendix | 4.41e-08 | 1 |
caecum | 4.41e-08 | 1 |
midgut | 4.41e-08 | 1 |
colon | 2.50e-07 | 9 |
gland of gut | 6.44e-07 | 10 |