FFCP PHASE2:Hg19::chr14:107062594..107062600,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene= |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:5653 |TSSclassifier=...") |
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|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=5653 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 22:52, 18 September 2015
Short description: | p1@IGHV4-55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV4-55_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -33bp_to_ENST00000520889_5end |
EntrezGene: | NA |
HGNC: | 5653 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@IGHV4-55 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.93e-16 | 1 |
plasma cell | 1.93e-16 | 1 |
plasmablast | 1.93e-16 | 1 |
mature B cell | 6.94e-09 | 2 |
pre-B-II cell | 6.94e-09 | 2 |
transitional stage B cell | 6.94e-09 | 2 |
small pre-B-II cell | 6.94e-09 | 2 |
immature B cell | 6.94e-09 | 2 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
parotid gland | 4.72e-17 | 1 |
cheek | 4.72e-17 | 1 |
parotid gland primordium | 4.72e-17 | 1 |
lymph node | 5.53e-17 | 1 |
tonsil | 6.47e-17 | 1 |
mucosa-associated lymphoid tissue | 6.47e-17 | 1 |
lymphoid tissue | 6.47e-17 | 1 |
tonsillar ring | 6.47e-17 | 1 |
adult organism | 4.37e-10 | 114 |
major salivary gland | 3.43e-09 | 2 |
Showing 1 to 10 of 15 entries