FFCP PHASE1:Hg19::chr14:107062594..107062600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5653 | |HGNC=5653 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000520889_5end | |association_with_transcript=-33bp_to_ENST00000520889_5end | ||
|cluster_id=chr14:107062594..107062600,- | |||
|coexpression_cluster_id=C70 | |coexpression_cluster_id=C70 | ||
|description=CAGE_peak_1_at_IGHV4-55_5end | |description=CAGE_peak_1_at_IGHV4-55_5end | ||
|id=chr14:107062594..107062600,- | |id=chr14:107062594..107062600,- | ||
|ontology_enrichment_celltype=CL:0000945!6.58e-09!24;CL:0000826!6.58e-09!24;CL:0000236!1.96e-08!14 | |ontology_enrichment_celltype=CL:0000945!6.58e-09!24;CL:0000826!6.58e-09!24;CL:0000236!1.96e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000946;1.65e-16;1!CL:0000786;1.65e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.93e-16,1;CL:0000786,1.93e-16,1;CL:0000980,1.93e-16,1;CL:0000785,6.94e-09,2;CL:0000955,6.94e-09,2;CL:0000818,6.94e-09,2;CL:0000954,6.94e-09,2;CL:0000816,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.72e-17;1!UBERON:0009143;1.65e-16;1!UBERON:0004872;1.24e-09;7!CL:0000954;6.42e-09;2!UBERON:0008814;6.42e-09;2!UBERON:0010056;6.42e-09;2!UBERON:0006965;6.42e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.81e-35!115;UBERON:0001829!4.65e-11!2;UBERON:0001044!5.40e-08!6;UBERON:0003293!5.40e-08!6;UBERON:0003294!5.40e-08!6;UBERON:0010047!5.40e-08!6;UBERON:0000167!5.40e-08!6;UBERON:0003408!6.50e-08!10;UBERON:0002106!2.80e-07!3;UBERON:0004854!2.80e-07!3;UBERON:0009034!2.80e-07!3;UBERON:0002095!2.80e-07!3;UBERON:0004782!2.80e-07!3;UBERON:0003281!2.80e-07!3;UBERON:0009664!2.80e-07!3;UBERON:0002296!2.80e-07!3;UBERON:0005602!2.80e-07!3;UBERON:0001179!2.80e-07!3;UBERON:0006293!2.80e-07!3;UBERON:0004921!8.51e-07!129;UBERON:0004185!8.51e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!4.81e-35!115;UBERON:0001829!4.65e-11!2;UBERON:0001044!5.40e-08!6;UBERON:0003293!5.40e-08!6;UBERON:0003294!5.40e-08!6;UBERON:0010047!5.40e-08!6;UBERON:0000167!5.40e-08!6;UBERON:0003408!6.50e-08!10;UBERON:0002106!2.80e-07!3;UBERON:0004854!2.80e-07!3;UBERON:0009034!2.80e-07!3;UBERON:0002095!2.80e-07!3;UBERON:0004782!2.80e-07!3;UBERON:0003281!2.80e-07!3;UBERON:0009664!2.80e-07!3;UBERON:0002296!2.80e-07!3;UBERON:0005602!2.80e-07!3;UBERON:0001179!2.80e-07!3;UBERON:0006293!2.80e-07!3;UBERON:0004921!8.51e-07!129;UBERON:0004185!8.51e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001831;4.72e-17;1!UBERON:0001567;4.72e-17;1!UBERON:0000029;5.52e-17;1!UBERON:0002372;6.47e-17;1!UBERON:0001961;6.47e-17;1!UBERON:0001744;6.47e-17;1!UBERON:0001042;6.47e-17;1!UBERON:0001735;6.47e-17;1!UBERON:0001829;3.43e-09;2!UBERON:0004089;3.43e-09;2!UBERON:0006562;4.01e-09;2!UBERON:0002465;3.54e-07;10!UBERON:0004921;7.62e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,4.72e-17,1;UBERON:0001567,4.72e-17,1;UBERON:0008801,4.72e-17,1;UBERON:0000029,5.53e-17,1;UBERON:0002372,6.47e-17,1;UBERON:0001961,6.47e-17,1;UBERON:0001744,6.47e-17,1;UBERON:0001735,6.47e-17,1;UBERON:0007023,4.37e-10,114;UBERON:0001829,3.43e-09,2;UBERON:0004089,3.43e-09,2;UBERON:0002465,3.54e-07,10;UBERON:0001042,3.89e-07,10;UBERON:0009145,3.89e-07,10;UBERON:0000166,5.85e-07,22 | |||
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|short_description=p1@IGHV4-55 | |short_description=p1@IGHV4-55 | ||
}} | }} |
Latest revision as of 22:52, 18 September 2015
Short description: | p1@IGHV4-55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV4-55_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -33bp_to_ENST00000520889_5end |
EntrezGene: | NA |
HGNC: | 5653 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.93e-16 | 1 |
plasma cell | 1.93e-16 | 1 |
plasmablast | 1.93e-16 | 1 |
mature B cell | 6.94e-09 | 2 |
pre-B-II cell | 6.94e-09 | 2 |
transitional stage B cell | 6.94e-09 | 2 |
small pre-B-II cell | 6.94e-09 | 2 |
immature B cell | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 4.72e-17 | 1 |
cheek | 4.72e-17 | 1 |
parotid gland primordium | 4.72e-17 | 1 |
lymph node | 5.53e-17 | 1 |
tonsil | 6.47e-17 | 1 |
mucosa-associated lymphoid tissue | 6.47e-17 | 1 |
lymphoid tissue | 6.47e-17 | 1 |
tonsillar ring | 6.47e-17 | 1 |
adult organism | 4.37e-10 | 114 |
major salivary gland | 3.43e-09 | 2 |
midface | 3.43e-09 | 2 |
lymphoid system | 3.54e-07 | 10 |
chordate pharynx | 3.89e-07 | 10 |
pharyngeal region of foregut | 3.89e-07 | 10 |
oral opening | 5.85e-07 | 22 |