FFCP PHASE1:Hg19::chr10:70092671..70092718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64081 | |EntrezGene=64081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23301 | |HGNC=23301 | ||
|TSSclassifier=strong | |||
|UniProt=P30039,C9JIM0 | |UniProt=P30039,C9JIM0 | ||
|association_with_transcript=0bp_to_ENST00000358769,ENST00000432941,ENST00000473901,NM_001033083,NM_022129,uc001jns.1,uc001jnt.1,uc001jnu.1_5end | |||
|cluster_id=chr10:70092671..70092718,- | |||
|description=CAGE_peak_1_at_PBLD_5end | |||
|id=chr10:70092671..70092718,- | |||
|ontology_enrichment_celltype=CL:0002057!1.95e-09!42;CL:0000557!3.05e-09!71;CL:0000766!2.68e-08!76;CL:0002009!3.29e-08!65;CL:0000860!3.45e-08!45;CL:0002194!1.22e-07!63;CL:0000576!1.22e-07!63;CL:0000040!1.22e-07!63;CL:0000559!1.22e-07!63;CL:0000839!1.58e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-10;33!CL:0002057;1.05e-10;33!CL:0000473;7.70e-08;39!CL:0000234;7.70e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.16e-10,67;CL:0000860,1.90e-09,42;CL:0002057,1.90e-09,42;CL:0002009,3.66e-09,61;CL:0000766,3.74e-09,72;CL:0002194,1.46e-08,59;CL:0000576,1.46e-08,59;CL:0000040,1.46e-08,59;CL:0000559,1.46e-08,59;CL:0000839,2.30e-08,66;CL:0000473,4.07e-08,48;CL:0000234,4.07e-08,48 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.92e-12!115;UBERON:0001017!1.60e-08!82;UBERON:0005743!1.70e-08!86;UBERON:0000955!2.02e-08!69;UBERON:0006238!2.02e-08!69;UBERON:0002371!4.15e-08!80;UBERON:0001049!4.27e-08!57;UBERON:0005068!4.27e-08!57;UBERON:0006241!4.27e-08!57;UBERON:0007135!4.27e-08!57;UBERON:0002616!6.66e-08!59;UBERON:0000073!1.30e-07!94;UBERON:0001016!1.30e-07!94;UBERON:0004765!2.31e-07!101;UBERON:0001434!2.31e-07!101;UBERON:0002390!2.56e-07!102;UBERON:0003061!2.56e-07!102;UBERON:0002193!6.06e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.82e-12,114;UBERON:0002371,6.42e-09,76;UBERON:0001017,1.28e-08,81;UBERON:0000955,1.64e-08,68;UBERON:0006238,1.64e-08,68;UBERON:0001434,2.20e-08,100;UBERON:0001049,3.52e-08,56;UBERON:0005068,3.52e-08,56;UBERON:0006241,3.52e-08,56;UBERON:0007135,3.52e-08,56;UBERON:0002390,6.06e-08,98;UBERON:0003061,6.06e-08,98;UBERON:0004765,6.51e-08,90;UBERON:0001016,1.11e-07,89;UBERON:0000073,1.44e-07,53;UBERON:0002616,1.44e-07,53;UBERON:0002193,1.53e-07,108;UBERON:0001474,2.59e-07,82;UBERON:0002405,3.00e-07,93 | |||
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| ||
|short_description=p1@PBLD | |||
}} | }} |
Latest revision as of 22:51, 18 September 2015
Short description: | p1@PBLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PBLD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358769, ENST00000432941, ENST00000473901, NM_001033083, NM_022129, uc001jns.1, uc001jnt.1, uc001jnu.1_5end |
EntrezGene: | PBLD |
HGNC: | 23301 |
UniProt: | P30039C9JIM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.16e-10 | 67 |
classical monocyte | 1.90e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.90e-09 | 42 |
macrophage dendritic cell progenitor | 3.66e-09 | 61 |
myeloid leukocyte | 3.74e-09 | 72 |
monopoietic cell | 1.46e-08 | 59 |
monocyte | 1.46e-08 | 59 |
monoblast | 1.46e-08 | 59 |
promonocyte | 1.46e-08 | 59 |
myeloid lineage restricted progenitor cell | 2.30e-08 | 66 |
defensive cell | 4.07e-08 | 48 |
phagocyte | 4.07e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.82e-12 | 114 |
bone marrow | 6.42e-09 | 76 |
central nervous system | 1.28e-08 | 81 |
brain | 1.64e-08 | 68 |
future brain | 1.64e-08 | 68 |
skeletal system | 2.20e-08 | 100 |
neural tube | 3.52e-08 | 56 |
neural rod | 3.52e-08 | 56 |
future spinal cord | 3.52e-08 | 56 |
neural keel | 3.52e-08 | 56 |
hematopoietic system | 6.06e-08 | 98 |
blood island | 6.06e-08 | 98 |
skeletal element | 6.51e-08 | 90 |
nervous system | 1.11e-07 | 89 |
regional part of nervous system | 1.44e-07 | 53 |
regional part of brain | 1.44e-07 | 53 |
hemolymphoid system | 1.53e-07 | 108 |
bone element | 2.59e-07 | 82 |
immune system | 3.00e-07 | 93 |