FFCP PHASE1:Hg19::chr19:47729885..47729930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422899 | |EntrezGene=100422899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=38190 | |HGNC=38190 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-268bp_to_NR_036158_5end | |association_with_transcript=-268bp_to_NR_036158_5end | ||
|cluster_id=chr19:47729885..47729930,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_2_at_MIR3190_5end | |description=CAGE_peak_2_at_MIR3190_5end | ||
|id=chr19:47729885..47729930,+ | |id=chr19:47729885..47729930,+ | ||
|ontology_enrichment_celltype=CL:0000766!9.53e-16!76;CL:0000557!8.25e-15!71;CL:0000860!1.08e-14!45;CL:0002057!1.13e-14!42;CL:0000839!9.20e-14!70;CL:0000738!8.06e-13!140;CL:0002009!1.79e-11!65;CL:0002194!8.79e-11!63;CL:0000576!8.79e-11!63;CL:0000040!8.79e-11!63;CL:0000559!8.79e-11!63;CL:0002031!3.04e-10!124;CL:0000763!1.07e-09!112;CL:0000049!1.07e-09!112;CL:0000037!4.33e-09!172;CL:0000566!4.33e-09!172;CL:0000988!5.02e-08!182;CL:0002032!7.04e-08!165;CL:0000837!7.04e-08!165;CL:0002087!1.14e-07!119;CL:0000784!3.46e-07!3;CL:0002274!3.58e-07!5;CL:0000457!3.58e-07!5;CL:0002191!3.58e-07!5;CL:0000097!3.58e-07!5;CL:0000831!3.58e-07!5;CL:0002028!3.58e-07!5 | |ontology_enrichment_celltype=CL:0000766!9.53e-16!76;CL:0000557!8.25e-15!71;CL:0000860!1.08e-14!45;CL:0002057!1.13e-14!42;CL:0000839!9.20e-14!70;CL:0000738!8.06e-13!140;CL:0002009!1.79e-11!65;CL:0002194!8.79e-11!63;CL:0000576!8.79e-11!63;CL:0000040!8.79e-11!63;CL:0000559!8.79e-11!63;CL:0002031!3.04e-10!124;CL:0000763!1.07e-09!112;CL:0000049!1.07e-09!112;CL:0000037!4.33e-09!172;CL:0000566!4.33e-09!172;CL:0000988!5.02e-08!182;CL:0002032!7.04e-08!165;CL:0000837!7.04e-08!165;CL:0002087!1.14e-07!119;CL:0000784!3.46e-07!3;CL:0002274!3.58e-07!5;CL:0000457!3.58e-07!5;CL:0002191!3.58e-07!5;CL:0000097!3.58e-07!5;CL:0000831!3.58e-07!5;CL:0002028!3.58e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;9.68e-37;5!CL:0000163;8.88e-21;9!CL:0000860;1.37e-09;33!CL:0002057;1.37e-09;33!CL:0000473;2.06e-08;39!CL:0000234;2.06e-08;39!CL:0000346;6.78e-08;3!CL:1000428;6.78e-08;3!CL:0002567;6.78e-08;3!CL:0000766;8.34e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.70e-37,5;CL:0002028,9.70e-37,5;CL:0000163,8.88e-21,9;CL:0000839,2.41e-14,66;CL:0000557,3.94e-14,67;CL:0000766,3.78e-13,72;CL:0002031,3.71e-10,120;CL:0000738,6.40e-09,136;CL:0000763,1.02e-08,108;CL:0000049,1.02e-08,108;CL:0000346,5.54e-08,3;CL:1000428,5.54e-08,3;CL:0000860,6.84e-08,42;CL:0002057,6.84e-08,42;CL:0002567,7.76e-08,3;CL:0002032,1.80e-07,161;CL:0000837,1.80e-07,161;CL:0000037,3.85e-07,168;CL:0000473,6.12e-07,48;CL:0000234,6.12e-07,48;CL:0000988,9.38e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.87e-12!80;UBERON:0002390!3.15e-11!102;UBERON:0003061!3.15e-11!102;UBERON:0001474!6.97e-11!86;UBERON:0002405!9.50e-11!115;UBERON:0002193!1.76e-09!112;UBERON:0004765!3.44e-08!101;UBERON:0001434!3.44e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;6.78e-08;3!UBERON:0001992;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.87e-12,76;UBERON:0001474,1.55e-11,82;UBERON:0004765,1.69e-10,90;UBERON:0002405,3.72e-10,93;UBERON:0002390,1.25e-09,98;UBERON:0003061,1.25e-09,98;UBERON:0001434,1.97e-09,100;UBERON:0002193,1.02e-08,108;UBERON:0000412,5.54e-08,3;UBERON:0001992,5.54e-08,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0,0.464858073811369,0,0.929119112685311,0,0,0,0.689491361473237,1.29096936716765,1.35426486594342,0.376484679085209,0,0.449446968890169,1.22433556948361,0,1.27867425159808,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,4.35389042635621,2.30591925467138,4.92345490362882,0,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0,0.464858073811369,0,0.929119112685311,0,0,0,0.689491361473237,1.29096936716765,1.35426486594342,0.376484679085209,0,0.449446968890169,1.22433556948361,0,1.27867425159808,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,4.35389042635621,2.30591925467138,4.92345490362882,0,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p2@MIR3190 | |short_description=p2@MIR3190 | ||
}} | }} |
Latest revision as of 22:48, 18 September 2015
Short description: | p2@MIR3190 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR3190_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -268bp_to_NR_036158_5end |
EntrezGene: | MIR3190 |
HGNC: | 38190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.70e-37 | 5 |
basophil mast progenitor cell | 9.70e-37 | 5 |
endocrine cell | 8.88e-21 | 9 |
myeloid lineage restricted progenitor cell | 2.41e-14 | 66 |
granulocyte monocyte progenitor cell | 3.94e-14 | 67 |
myeloid leukocyte | 3.78e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 3.71e-10 | 120 |
leukocyte | 6.40e-09 | 136 |
myeloid cell | 1.02e-08 | 108 |
common myeloid progenitor | 1.02e-08 | 108 |
hair follicle dermal papilla cell | 5.54e-08 | 3 |
stem cell of epidermis | 5.54e-08 | 3 |
classical monocyte | 6.84e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.84e-08 | 42 |
light melanocyte | 7.76e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.80e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-07 | 161 |
hematopoietic stem cell | 3.85e-07 | 168 |
defensive cell | 6.12e-07 | 48 |
phagocyte | 6.12e-07 | 48 |
hematopoietic cell | 9.38e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.87e-12 | 76 |
bone element | 1.55e-11 | 82 |
skeletal element | 1.69e-10 | 90 |
immune system | 3.72e-10 | 93 |
hematopoietic system | 1.25e-09 | 98 |
blood island | 1.25e-09 | 98 |
skeletal system | 1.97e-09 | 100 |
hemolymphoid system | 1.02e-08 | 108 |
dermal papilla | 5.54e-08 | 3 |
papillary layer of dermis | 5.54e-08 | 3 |