FFCP PHASE1:Hg19::chr14:107013429..107013434,-: Difference between revisions
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|id=chr14:107013429..107013434,-
|short_description=p3@IGHV3-49
|description=CAGE_peak_3_at_IGHV3-49_5end
|association_with_transcript=42bp_to_ENST00000390625_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5607 | |HGNC=5607 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000390625_5end | |||
|cluster_id=chr14:107013429..107013434,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_3_at_IGHV3-49_5end | |||
|id=chr14:107013429..107013434,- | |||
|ontology_enrichment_celltype=CL:0000236!2.95e-42!14;CL:0000945!1.09e-23!24;CL:0000826!1.09e-23!24;CL:0000842!8.77e-15!3;CL:0000224!3.23e-11!4;CL:0000838!1.04e-09!52;CL:0000542!1.74e-09!53;CL:0000051!1.74e-09!53;CL:0000080!1.25e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.97e-108;13!CL:0000945;3.58e-58;24!CL:0000542;2.22e-22;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.56e-100,14;CL:0000945,3.69e-58,24;CL:0000826,3.69e-58,24;CL:0000838,2.10e-26,52;CL:0000542,6.87e-26,53;CL:0000051,6.87e-26,53;CL:0002087,2.74e-11,115;CL:0002031,8.90e-11,120;CL:0000738,2.17e-09,136;CL:0002032,9.13e-08,161;CL:0000837,9.13e-08,161;CL:0000037,2.14e-07,168;CL:0000988,5.80e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.22e-22;53!UBERON:0006965;2.67e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.06e-15!15;UBERON:0000179!7.06e-15!15;UBERON:0000463!7.06e-15!15;UBERON:0007023!2.09e-13!115;UBERON:0003408!1.66e-11!10;UBERON:0004177!8.10e-11!7;UBERON:0001829!1.20e-10!2;UBERON:0001044!9.46e-08!6;UBERON:0003293!9.46e-08!6;UBERON:0003294!9.46e-08!6;UBERON:0010047!9.46e-08!6;UBERON:0000167!9.46e-08!6;UBERON:0002106!2.34e-07!3;UBERON:0004854!2.34e-07!3;UBERON:0009034!2.34e-07!3;UBERON:0002095!2.34e-07!3;UBERON:0004782!2.34e-07!3;UBERON:0003281!2.34e-07!3;UBERON:0009664!2.34e-07!3;UBERON:0002296!2.34e-07!3;UBERON:0005602!2.34e-07!3;UBERON:0001179!2.34e-07!3;UBERON:0006293!2.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.66e-15;1!UBERON:0002372;2.75e-15;1!UBERON:0001961;2.75e-15;1!UBERON:0001744;2.75e-15;1!UBERON:0001042;2.75e-15;1!UBERON:0001735;2.75e-15;1!UBERON:0006562;2.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.54e-15,1;UBERON:0002372,2.75e-15,1;UBERON:0001961,2.75e-15,1;UBERON:0001744,2.75e-15,1;UBERON:0001735,2.75e-15,1 | |||
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|short_description=p3@IGHV3-49 | |||
}} | }} |
Latest revision as of 22:46, 18 September 2015
Short description: | p3@IGHV3-49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IGHV3-49_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 42bp_to_ENST00000390625_5end |
EntrezGene: | NA |
HGNC: | 5607 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.56e-100 | 14 |
lymphocyte of B lineage | 3.69e-58 | 24 |
pro-B cell | 3.69e-58 | 24 |
lymphoid lineage restricted progenitor cell | 2.10e-26 | 52 |
lymphocyte | 6.87e-26 | 53 |
common lymphoid progenitor | 6.87e-26 | 53 |
nongranular leukocyte | 2.74e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 8.90e-11 | 120 |
leukocyte | 2.17e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.13e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.13e-08 | 161 |
hematopoietic stem cell | 2.14e-07 | 168 |
hematopoietic cell | 5.80e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.54e-15 | 1 |
tonsil | 2.75e-15 | 1 |
mucosa-associated lymphoid tissue | 2.75e-15 | 1 |
lymphoid tissue | 2.75e-15 | 1 |
tonsillar ring | 2.75e-15 | 1 |