FFCP PHASE1:Hg19::chr3:52232168..52232186,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=396 | |||
|TSSclassifier=strong | |||
|UniProt=P13196 | |||
|association_with_transcript=8bp_to_ENST00000484952_5end | |||
|cluster_id=chr3:52232168..52232186,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_1_at_ALAS1_5end | |||
|id=chr3:52232168..52232186,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.44e-10!70;CL:0002194!1.55e-10!63;CL:0000576!1.55e-10!63;CL:0000040!1.55e-10!63;CL:0000559!1.55e-10!63;CL:0002009!2.22e-10!65;CL:0000763!2.65e-10!112;CL:0000049!2.65e-10!112;CL:0000557!3.97e-10!71;CL:0000766!5.46e-09!76;CL:0002057!1.58e-08!42;CL:0000860!4.63e-08!45;CL:0000115!4.01e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.73e-12;39!CL:0000234;1.73e-12;39!CL:0000860;5.88e-12;33!CL:0002057;5.88e-12;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.17e-11,59;CL:0000576,5.17e-11,59;CL:0000040,5.17e-11,59;CL:0000559,5.17e-11,59;CL:0000839,5.45e-11,66;CL:0000473,5.63e-11,48;CL:0000234,5.63e-11,48;CL:0002009,7.87e-11,61;CL:0000763,1.59e-10,108;CL:0000049,1.59e-10,108;CL:0000557,1.61e-10,67;CL:0000766,2.68e-09,72;CL:0000860,1.58e-08,42;CL:0002057,1.58e-08,42;CL:0000115,2.17e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;5.80e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.55e-13!216;UBERON:0000926!2.29e-12!448;UBERON:0004120!2.29e-12!448;UBERON:0006603!2.29e-12!448;UBERON:0002405!3.25e-12!115;UBERON:0000480!5.54e-10!626;UBERON:0000467!6.47e-10!625;UBERON:0002371!4.40e-09!80;UBERON:0002193!5.35e-09!112;UBERON:0003914!7.52e-09!118;UBERON:0001474!1.41e-08!86;UBERON:0000923!6.96e-08!604;UBERON:0005291!6.96e-08!604;UBERON:0006598!6.96e-08!604;UBERON:0002532!6.96e-08!604;UBERON:0000055!7.67e-08!69;UBERON:0002050!8.54e-08!605;UBERON:0005423!8.54e-08!605;UBERON:0000468!1.46e-07!659;UBERON:0004111!5.24e-07!241;UBERON:0002390!5.32e-07!102;UBERON:0003061!5.32e-07!102;UBERON:0000922!6.38e-07!612;UBERON:0000062!7.95e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.53e-12,203;UBERON:0002405,1.82e-10,93;UBERON:0002371,2.24e-09,76;UBERON:0002193,3.49e-09,108;UBERON:0003914,4.90e-09,117;UBERON:0001474,7.97e-09,82;UBERON:0000926,1.72e-08,315;UBERON:0004120,1.72e-08,315;UBERON:0006603,1.72e-08,315;UBERON:0000055,7.45e-08,68;UBERON:0004765,1.39e-07,90;UBERON:0002390,3.78e-07,98;UBERON:0003061,3.78e-07,98;UBERON:0000922,3.80e-07,592;UBERON:0005423,4.85e-07,581;UBERON:0004111,7.11e-07,240 | |||
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| |||
|short_description=p1@ALAS1 | |||
}} |
Latest revision as of 22:45, 18 September 2015
Short description: | p1@ALAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALAS1_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 8bp_to_ENST00000484952_5end |
EntrezGene: | ALAS1 |
HGNC: | 396 |
UniProt: | P13196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.17e-11 | 59 |
monocyte | 5.17e-11 | 59 |
monoblast | 5.17e-11 | 59 |
promonocyte | 5.17e-11 | 59 |
myeloid lineage restricted progenitor cell | 5.45e-11 | 66 |
defensive cell | 5.63e-11 | 48 |
phagocyte | 5.63e-11 | 48 |
macrophage dendritic cell progenitor | 7.87e-11 | 61 |
myeloid cell | 1.59e-10 | 108 |
common myeloid progenitor | 1.59e-10 | 108 |
granulocyte monocyte progenitor cell | 1.61e-10 | 67 |
myeloid leukocyte | 2.68e-09 | 72 |
classical monocyte | 1.58e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-08 | 42 |
endothelial cell | 2.17e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.53e-12 | 203 |
immune system | 1.82e-10 | 93 |
bone marrow | 2.24e-09 | 76 |
hemolymphoid system | 3.49e-09 | 108 |
epithelial tube | 4.90e-09 | 117 |
bone element | 7.97e-09 | 82 |
mesoderm | 1.72e-08 | 315 |
mesoderm-derived structure | 1.72e-08 | 315 |
presumptive mesoderm | 1.72e-08 | 315 |
vessel | 7.45e-08 | 68 |
skeletal element | 1.39e-07 | 90 |
hematopoietic system | 3.78e-07 | 98 |
blood island | 3.78e-07 | 98 |
embryo | 3.80e-07 | 592 |
developing anatomical structure | 4.85e-07 | 581 |
anatomical conduit | 7.11e-07 | 240 |