FFCP PHASE1:Hg19::chr18:19749386..19749404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2627 | |EntrezGene=2627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4174 | |HGNC=4174 | ||
|TSSclassifier=strong | |||
|UniProt=Q92908 | |UniProt=Q92908 | ||
|association_with_transcript=0bp_to_ENST00000269216_5end | |association_with_transcript=0bp_to_ENST00000269216_5end | ||
|cluster_id=chr18:19749386..19749404,+ | |||
|description=CAGE_peak_2_at_GATA6_5end | |description=CAGE_peak_2_at_GATA6_5end | ||
|id=chr18:19749386..19749404,+ | |id=chr18:19749386..19749404,+ | ||
|ontology_enrichment_celltype=CL:0000192!1.64e-13!42;CL:0000514!1.64e-13!42;CL:0000183!1.42e-12!59;CL:0000187!1.47e-12!54;CL:0000359!3.01e-12!32;CL:0000222!5.80e-12!119;CL:0000680!4.36e-11!57;CL:0000056!4.36e-11!57;CL:0000355!4.36e-11!57;CL:0000393!7.28e-10!60;CL:0000211!7.28e-10!60;CL:0002494!7.05e-09!16;CL:0000055!7.40e-09!180;CL:0000220!1.17e-07!246;CL:0002321!2.87e-07!248 | |ontology_enrichment_celltype=CL:0000192!1.64e-13!42;CL:0000514!1.64e-13!42;CL:0000183!1.42e-12!59;CL:0000187!1.47e-12!54;CL:0000359!3.01e-12!32;CL:0000222!5.80e-12!119;CL:0000680!4.36e-11!57;CL:0000056!4.36e-11!57;CL:0000355!4.36e-11!57;CL:0000393!7.28e-10!60;CL:0000211!7.28e-10!60;CL:0002494!7.05e-09!16;CL:0000055!7.40e-09!180;CL:0000220!1.17e-07!246;CL:0002321!2.87e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.45e-11;32!CL:0002494;3.80e-10;16!CL:0000192;5.66e-10;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.06e-12,43;CL:0000514,1.06e-12,43;CL:0000359,5.83e-12,32;CL:0000187,3.53e-11,55;CL:0000222,7.49e-11,121;CL:0002494,3.42e-10,16;CL:0000680,7.67e-10,58;CL:0000056,7.67e-10,58;CL:0000355,7.67e-10,58;CL:0000393,3.13e-09,61;CL:0000211,3.13e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000514;5.66e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!5.56e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.56e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.84e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.10e-27!118;UBERON:0004872!3.52e-25!84;UBERON:0001009!9.63e-19!113;UBERON:0000490!8.07e-18!138;UBERON:0001981!1.48e-17!60;UBERON:0007500!1.48e-17!60;UBERON:0004537!1.48e-17!60;UBERON:0006965!1.48e-17!60;UBERON:0004535!3.40e-17!110;UBERON:0001637!5.86e-16!42;UBERON:0003509!5.86e-16!42;UBERON:0004572!5.86e-16!42;UBERON:0007100!7.06e-16!27;UBERON:0003104!4.31e-15!238;UBERON:0009142!4.31e-15!238;UBERON:0002049!1.06e-14!79;UBERON:0007798!1.06e-14!79;UBERON:0000055!5.88e-14!69;UBERON:0000948!6.19e-14!24;UBERON:0005498!6.19e-14!24;UBERON:0004140!6.19e-14!24;UBERON:0009881!6.19e-14!24;UBERON:0004141!6.19e-14!24;UBERON:0003084!6.19e-14!24;UBERON:0007005!6.19e-14!24;UBERON:0004139!6.19e-14!24;UBERON:0004291!6.19e-14!24;UBERON:0002100!8.08e-14!216;UBERON:0000481!1.03e-12!347;UBERON:0001048!1.80e-12!168;UBERON:0004573!3.52e-12!33;UBERON:0004571!3.52e-12!33;UBERON:0002385!5.92e-12!63;UBERON:0001015!5.92e-12!63;UBERON:0000383!5.92e-12!63;UBERON:0005256!1.44e-11!143;UBERON:0000926!2.68e-11!448;UBERON:0004120!2.68e-11!448;UBERON:0006603!2.68e-11!448;UBERON:0001134!5.30e-11!61;UBERON:0002036!5.30e-11!61;UBERON:0003082!5.30e-11!61;UBERON:0003103!6.39e-11!69;UBERON:0000483!1.49e-10!309;UBERON:0000119!2.12e-10!312;UBERON:0000477!3.42e-10!286;UBERON:0000025!6.86e-10!194;UBERON:0004458!7.31e-10!49;UBERON:0004111!8.76e-10!241;UBERON:0004921!3.29e-09!129;UBERON:0004185!3.29e-09!129;UBERON:0002323!3.38e-09!46;UBERON:0000466!5.85e-09!126;UBERON:0003886!1.49e-08!63;UBERON:0009569!2.18e-08!113;UBERON:0004290!3.66e-08!70;UBERON:0000486!4.83e-08!82;UBERON:0004119!4.94e-08!169;UBERON:0000925!4.94e-08!169;UBERON:0006595!4.94e-08!169;UBERON:0005156!5.05e-08!59;UBERON:0000990!5.05e-08!59;UBERON:0001007!6.54e-08!155;UBERON:0001555!6.54e-08!155;UBERON:0007026!6.54e-08!155;UBERON:0000468!1.53e-07!659;UBERON:0003929!5.21e-07!54;UBERON:0000947!6.19e-07!21;UBERON:0010191!6.19e-07!21;UBERON:0002417!7.26e-07!61;UBERON:0000916!7.26e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.05e-17;25!UBERON:0000948;9.88e-15;22!UBERON:0001637;7.56e-12;42!UBERON:0003509;7.56e-12;42!UBERON:0004572;7.56e-12;42!UBERON:0004573;2.23e-10;33!UBERON:0004571;2.23e-10;33!UBERON:0007500;9.09e-09;56!UBERON:0001981;9.09e-09;56!UBERON:0004537;9.09e-09;56!UBERON:0005409;2.01e-07;22!UBERON:0004458;9.54e-07;48 | |||
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| ||
|short_description=p2@GATA6 | |short_description=p2@GATA6 | ||
}} | }} |
Latest revision as of 22:41, 18 September 2015
Short description: | p2@GATA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GATA6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000269216_5end |
EntrezGene: | GATA6 |
HGNC: | 4174 |
UniProt: | Q92908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.06e-12 | 43 |
smooth muscle myoblast | 1.06e-12 | 43 |
vascular associated smooth muscle cell | 5.83e-12 | 32 |
muscle cell | 3.53e-11 | 55 |
mesodermal cell | 7.49e-11 | 121 |
cardiocyte | 3.42e-10 | 16 |
muscle precursor cell | 7.67e-10 | 58 |
myoblast | 7.67e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.67e-10 | 58 |
electrically responsive cell | 3.13e-09 | 61 |
electrically active cell | 3.13e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.84e-08 | 14 |