FFCP PHASE1:Hg19::chr12:52715179..52715182,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3889 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6460 | |||
|TSSclassifier=strong | |||
|UniProt=P78385 | |||
|association_with_transcript=0bp_to_ENST00000293670,NM_002282,uc001saf.2_5end | |||
|cluster_id=chr12:52715179..52715182,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRT83_5end | |||
|id=chr12:52715179..52715182,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.34e-66;1!UBERON:0007123;1.71e-14;5 | |||
|ontology_enrichment_disease=DOID:178!6.26e-12!1;DOID:326!6.26e-12!1;DOID:3978!6.26e-12!1;DOID:3394!6.26e-12!1;DOID:5844!6.26e-12!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!4.60e-15!3;UBERON:0005290!4.60e-15!3;UBERON:0010096!4.60e-15!3;UBERON:0001049!1.89e-13!57;UBERON:0005068!1.89e-13!57;UBERON:0006241!1.89e-13!57;UBERON:0007135!1.89e-13!57;UBERON:0007023!2.18e-13!115;UBERON:0002298!2.38e-12!8;UBERON:0007029!2.63e-12!1;UBERON:0007190!9.61e-12!1;UBERON:0002336!1.63e-11!1;UBERON:0001018!1.63e-11!1;UBERON:0002473!1.63e-11!1;UBERON:0005340!1.63e-11!1;UBERON:0002316!1.63e-11!1;UBERON:0003544!1.63e-11!1;UBERON:0001020!1.63e-11!1;UBERON:0005970!1.63e-11!1;UBERON:0002437!1.63e-11!1;UBERON:0008814!1.71e-11!15;UBERON:0003076!1.91e-11!15;UBERON:0003057!1.91e-11!15;UBERON:0001017!4.74e-11!82;UBERON:0000955!9.86e-11!69;UBERON:0006238!9.86e-11!69;UBERON:0005743!1.74e-10!86;UBERON:0002616!3.21e-10!59;UBERON:0002046!1.76e-09!5;UBERON:0004117!1.76e-09!5;UBERON:0007689!1.76e-09!5;UBERON:0007123!1.76e-09!5;UBERON:0003091!1.76e-09!5;UBERON:0000073!2.20e-09!94;UBERON:0001016!2.20e-09!94;UBERON:0009722!3.73e-09!11;UBERON:0007690!3.73e-09!11;UBERON:0003075!1.40e-08!86;UBERON:0007284!1.40e-08!86;UBERON:0004733!2.06e-08!12;UBERON:0002028!2.06e-08!12;UBERON:0007277!2.06e-08!12;UBERON:0002346!3.77e-08!90;UBERON:0000153!4.91e-08!129;UBERON:0007811!4.91e-08!129;UBERON:0004732!8.39e-08!13;UBERON:0001894!5.19e-07!7;UBERON:0006222!5.19e-07!7;UBERON:0004121!5.22e-07!169;UBERON:0000033!5.66e-07!123;UBERON:0000924!8.30e-07!173;UBERON:0006601!8.30e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.23e-66;1!UBERON:0000014;7.35e-18;4!UBERON:0002046;1.71e-14;5!UBERON:0000922;6.04e-08;49!UBERON:0002331;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.23e-66,1;UBERON:0000014,7.35e-18,4;UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6284858195376,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0.0645889098360061,0,0,0.190941474834495,2.02117188958219,0,0.342233301085281,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p1@KRT83 | |||
}} |
Latest revision as of 22:29, 18 September 2015
Short description: | p1@KRT83 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT83_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 0bp_to_ENST00000293670, NM_002282, uc001saf.2_5end |
EntrezGene: | KRT83 |
HGNC: | 6460 |
UniProt: | P78385 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 1.23e-66 | 1 |
zone of skin | 7.35e-18 | 4 |
thyroid gland | 1.83e-14 | 5 |
pharyngeal pouch | 1.83e-14 | 5 |
thyroid diverticulum | 1.83e-14 | 5 |
pharyngeal pouch 2 | 1.83e-14 | 5 |
thyroid primordium | 1.83e-14 | 5 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |