FFCP PHASE1:Hg19::chr17:17942594..17942604,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79018 | |EntrezGene=79018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28453 | |HGNC=28453 | ||
|TSSclassifier=strong | |||
|UniProt=B3KXL6,Q8IVV7 | |UniProt=B3KXL6,Q8IVV7 | ||
|association_with_transcript=-6bp_to_NM_024052,uc002gsg.1_5end | |association_with_transcript=-6bp_to_NM_024052,uc002gsg.1_5end | ||
|cluster_id=chr17:17942594..17942604,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_C17orf39_5end | |description=CAGE_peak_6_at_C17orf39_5end | ||
|id=chr17:17942594..17942604,+ | |id=chr17:17942594..17942604,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.58e-50;1!UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10!UBERON:0003056;1.12e-17;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000941!1.78e-29!1;UBERON:0004904!1.78e-29!1;UBERON:0002464!1.78e-29!1;UBERON:0001021!1.78e-29!1;UBERON:0001785!1.78e-29!1;UBERON:0003714!1.78e-15!2;UBERON:0005162!1.78e-15!2;UBERON:0000122!1.78e-15!2;UBERON:0000473!2.65e-15!8;UBERON:0003135!2.07e-11!11 | |ontology_enrichment_uberon=UBERON:0000941!1.78e-29!1;UBERON:0004904!1.78e-29!1;UBERON:0002464!1.78e-29!1;UBERON:0001021!1.78e-29!1;UBERON:0001785!1.78e-29!1;UBERON:0003714!1.78e-15!2;UBERON:0005162!1.78e-15!2;UBERON:0000122!1.78e-15!2;UBERON:0000473!2.65e-15!8;UBERON:0003135!2.07e-11!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.58e-50;1!UBERON:0001785;6.58e-50;1!UBERON:0002464;6.58e-50;1!UBERON:0004904;6.58e-50;1!UBERON:0001021;6.58e-50;1!UBERON:0000473;8.65e-26;8!UBERON:0003714;9.18e-26;2!UBERON:0005162;9.18e-26;2!UBERON:0000122;9.18e-26;2!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0000010;8.85e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.58e-50,1;UBERON:0001785,6.58e-50,1;UBERON:0002464,6.58e-50,1;UBERON:0004904,6.58e-50,1;UBERON:0001021,6.58e-50,1;UBERON:0003902,6.58e-50,1;UBERON:0005425,6.58e-50,1;UBERON:0000473,8.65e-26,8;UBERON:0003714,9.18e-26,2;UBERON:0005162,9.18e-26,2;UBERON:0000122,9.18e-26,2;UBERON:0003135,4.28e-19,11;UBERON:0001781,1.29e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0000010,8.85e-07,8 | |||
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|short_description=p6@C17orf39 | |short_description=p6@C17orf39 | ||
}} | }} |
Latest revision as of 22:27, 18 September 2015
Short description: | p6@C17orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C17orf39_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -6bp_to_NM_024052, uc002gsg.1_5end |
EntrezGene: | C17orf39 |
HGNC: | 28453 |
UniProt: | B3KXL6Q8IVV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.58e-50 | 1 |
cranial nerve | 6.58e-50 | 1 |
nerve trunk | 6.58e-50 | 1 |
nerve connecting eye with brain | 6.58e-50 | 1 |
nerve | 6.58e-50 | 1 |
retinal neural layer | 6.58e-50 | 1 |
presumptive neural retina | 6.58e-50 | 1 |
testis | 8.65e-26 | 8 |
neural tissue | 9.18e-26 | 2 |
multi cell component structure | 9.18e-26 | 2 |
neuron projection bundle | 9.18e-26 | 2 |
male reproductive organ | 4.28e-19 | 11 |
layer of retina | 1.29e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
peripheral nervous system | 8.85e-07 | 8 |