FFCP PHASE2:Hg19::chr11:62688789..62688840,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1128 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1950 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1950 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P11229,Q53XZ3 | ||
|association_with_transcript=171bp_to_NM_000738,uc001nwi.2_5end | |association_with_transcript=171bp_to_NM_000738,uc001nwi.2_5end | ||
|cluster_id=chr11:62688789..62688840,- | |cluster_id=chr11:62688789..62688840,- | ||
Latest revision as of 22:22, 18 September 2015
| Short description: | p1@CHRM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CHRM1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 171bp_to_NM_000738, uc001nwi.2_5end |
| EntrezGene: | CHRM1 |
| HGNC: | 1950 |
| UniProt: | P11229Q53XZ3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CHRM1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| telencephalon | 1.28e-78 | 34 |
| cerebral hemisphere | 1.36e-78 | 32 |
| regional part of forebrain | 1.74e-77 | 41 |
| forebrain | 1.74e-77 | 41 |
| anterior neural tube | 1.74e-77 | 41 |
| future forebrain | 1.74e-77 | 41 |
| regional part of telencephalon | 5.83e-73 | 32 |
| brain grey matter | 6.71e-73 | 34 |
| gray matter | 6.71e-73 | 34 |
| nervous system | 4.56e-68 | 89 |
Showing 1 to 10 of 81 entries
