FFCP PHASE1:Hg19::chr17:17740823..17740833,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:17740823..17740833,- to FFCP PHASE1:Hg19::chr17:17740823..17740833,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6720 | |EntrezGene=6720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11289 | |HGNC=11289 | ||
|TSSclassifier=strong | |||
|UniProt=P36956,B0I4X3 | |UniProt=P36956,B0I4X3 | ||
|association_with_transcript=-498bp_to_ENST00000338854,NM_001005291,NM_004176,uc002grt.1,uc002gru.1,uc010cpq.1_5end | |||
|cluster_id=chr17:17740823..17740833,- | |||
|description=CAGE_peak_8_at_SREBF1_5end | |||
|id=chr17:17740823..17740833,- | |||
|ontology_enrichment_celltype=CL:0000055!3.59e-11!180;CL:0000680!1.29e-07!57;CL:0000056!1.29e-07!57;CL:0000355!1.29e-07!57;CL:0000183!2.14e-07!59;CL:0000548!2.34e-07!679;CL:0000004!2.34e-07!679;CL:0000255!2.34e-07!679;CL:0000187!4.55e-07!54;CL:0000012!5.95e-07!682 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,8.05e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.39e-09!216;UBERON:0002385!2.39e-07!63;UBERON:0001015!2.39e-07!63;UBERON:0000383!2.39e-07!63;UBERON:0001134!2.55e-07!61;UBERON:0002036!2.55e-07!61;UBERON:0003082!2.55e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,8.05e-07,10;UBERON:0004695,8.05e-07,10;UBERON:0002111,8.05e-07,10;UBERON:0004178,8.05e-07,10 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,0.522371256399677,0.491467873003018,0.697801167972428,0,0.263766978228454,0.618831764800233,0.331397375727916,0.672325146451775,1.20538905604795,1.46062018077475,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,1.0843174571537,1.00267582127178,0.434539556882471,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,2.48485975847659,0.12663051166458,0.397227542439656,0.573673241497627,0.709336764396714,0.560677600142307,2.1349799145941,0.98667019366864,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0.937285727335186,1.24864030732128,0,0.747243402759005,0.469737994575059,0,0,0,0,1.03325781175765,0,0.989067717114227,0,1.43723628363248,0.168336113954066,0,0,0,0.30648779579902,0.901428353439581,0.453728732640084,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,1.54584324027377,0.930584281657949,0,0.194874010322397,0.504867548488229,0.828449087780694,0.161646056818812,0,0.503760491138201,0,0,0.272746120590835,0.573609190778008,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.928735856063958,1.44375896333917,0.354920400119532,0.505754070234305,0.241011029883482,0.220587945464788,0.653638332277218,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.548751427043128,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0.126995788584338,2.29193055334967,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0.448524337381443,0.43596006883328,0.1466765716419,0.387815147273333,7.15312891703765,0,1.59562869950922,1.04007436911366,0.257207374262142,0,0.532844358032199,0.142977993658148,1.62786481617433,0,0,0.355391948742546,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.892144943985809,0.315404830067869,0.35142424497814,1.20378439891088,4.5481500811197,1.03473071292505,0.664225598535437,0,0.521301686808497,1.76221041716467,0.686286847621712,0,0,0,0.303127571446259,0,0,0.496215615637554,0.153461973288062,1.12264037773229,1.28139149255701,0.511707249066704,0.64341568457443,0,0.308419387605311,0.710246901252508,0.492762936082855,0.519254429183621,0.116210378459959,0.120859449591622,0,0.552485933615378,0.803701137152247,0.364182336013434,0.393373244878272,0.451199612907412,0.0770153371044148,1.56869953835371,0,0.211103257785751,2.27466768141793,0.340187410553031,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0.574265537996172,0.650060246036521,0,0.676695028044854,0.308097234229289,0.307007349452259,0.137836572484531,0.859361958946189,0.435050081742686,0.170453254832202,1.15741646340759,0.495854746082934,0.192190067365106,0.255225424989168,0.30347334256665,0,1.25924938732256,0.6970372701606,0.616067160352178,0,2.60979897622522,0.74129687641568,0,0.372158369359667,0.316379424718726,0.190630193923825,0.511795582622668,0,0,1.56989728039846,0,0.54907405947211,0.353437207037059,0.606547444719948,0,0,0,0.243713489631284,1.05650146756755,0.818999468447914,0.707027159768564,0,0.551365343546124,0.66343897524122,0,0.578775534266688,1.31178950409327,0.202910376962704,0,0,0.143411352204052,0.392996164052485,0,0.709522128141196,1.05553817648832,0.329294892959902,0,1.04980416073495,0.0962221127255121,0.670302275535787,2.17781969722645,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0.568272293612826,0,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0.537063524026827,0,0,0,1.11136990144637,0,0,0,0,1.31189999994294,0,0.1137934482855,1.01701460117107,0.472775363535873,0,0,0.520874984799877,0,0.120596438625408,0,0,0,0,0.10893846351899,0.278847488557207,0.615602068030377,0.683652335082007,0,0.538545866458633,0.54323685961004,1.27600463892768,0.274792780205587,1.06606955203727,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.335643173951685,0,0.158936578980379,0.210998064528027,0.489698424477443,0.141353071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| ||
|short_description=p8@SREBF1 | |||
}} | }} |
Latest revision as of 22:19, 18 September 2015
Short description: | p8@SREBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SREBF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -498bp_to_ENST00000338854, NM_001005291, NM_004176, uc002grt.1, uc002gru.1, uc010cpq.1_5end |
EntrezGene: | SREBF1 |
HGNC: | 11289 |
UniProt: | P36956B0I4X3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 8.05e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 8.05e-07 | 10 |
arterial system smooth muscle | 8.05e-07 | 10 |
artery smooth muscle tissue | 8.05e-07 | 10 |
aorta smooth muscle tissue | 8.05e-07 | 10 |