FFCP PHASE1:Hg19::chr10:69644451..69644477,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:69644451..69644477,+
|short_description=p2@SIRT1
|description=CAGE_peak_2_at_SIRT1_5end
|association_with_transcript=24bp_to_ENST00000212015,NM_012238,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23411 | |EntrezGene=23411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14929 | |HGNC=14929 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EB6 | |UniProt=Q96EB6 | ||
|association_with_transcript=24bp_to_ENST00000212015,NM_012238,uc001jnd.2_5end | |||
|cluster_id=chr10:69644451..69644477,+ | |||
|description=CAGE_peak_2_at_SIRT1_5end | |||
|id=chr10:69644451..69644477,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.26e-09!172;CL:0000566!5.26e-09!172;CL:0002032!1.59e-08!165;CL:0000837!1.59e-08!165;CL:0000791!1.72e-07!18;CL:0000789!1.72e-07!18;CL:0002420!1.72e-07!18;CL:0002419!1.72e-07!18;CL:0000790!1.72e-07!18;CL:0000988!2.39e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.53e-07;18!CL:0000789;1.53e-07;18!CL:0002419;1.53e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.00e-09,168;CL:0002032,6.13e-09,161;CL:0000837,6.13e-09,161;CL:0000988,5.02e-08,177;CL:0000791,1.72e-07,18;CL:0000789,1.72e-07,18;CL:0002420,1.72e-07,18;CL:0002419,1.72e-07,18;CL:0000790,1.72e-07,18;CL:0002031,5.15e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.53e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.96e-27!115;UBERON:0000073!3.47e-17!94;UBERON:0001016!3.47e-17!94;UBERON:0001017!3.39e-16!82;UBERON:0005743!1.69e-15!86;UBERON:0001049!1.69e-15!57;UBERON:0005068!1.69e-15!57;UBERON:0006241!1.69e-15!57;UBERON:0007135!1.69e-15!57;UBERON:0000955!1.67e-14!69;UBERON:0006238!1.67e-14!69;UBERON:0003080!5.25e-14!42;UBERON:0002780!1.05e-13!41;UBERON:0001890!1.05e-13!41;UBERON:0006240!1.05e-13!41;UBERON:0002616!1.31e-12!59;UBERON:0002346!1.17e-11!90;UBERON:0003075!1.45e-11!86;UBERON:0007284!1.45e-11!86;UBERON:0001893!6.82e-11!34;UBERON:0002791!1.43e-10!33;UBERON:0002020!1.66e-10!34;UBERON:0003528!1.66e-10!34;UBERON:0001869!3.93e-10!32;UBERON:0003056!1.17e-09!61;UBERON:0002619!1.93e-08!22;UBERON:0000153!2.63e-08!129;UBERON:0007811!2.63e-08!129;UBERON:0001950!4.79e-08!20;UBERON:0000956!8.67e-08!25;UBERON:0000203!8.67e-08!25;UBERON:0000924!9.73e-08!173;UBERON:0006601!9.73e-08!173;UBERON:0004121!1.49e-07!169;UBERON:0000033!2.92e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.68e-10;41!UBERON:0001890;2.68e-10;41!UBERON:0001893;1.97e-09;34!UBERON:0002791;2.74e-09;32!UBERON:0001869;2.76e-09;32!UBERON:0000073;4.16e-09;53!UBERON:0002616;4.16e-09;53!UBERON:0003528;4.66e-09;34!UBERON:0002020;4.66e-09;34!UBERON:0002619;2.15e-08;22!UBERON:0007023;2.82e-08;114!UBERON:0001950;5.78e-08;20!UBERON:0000956;7.71e-08;25!UBERON:0000203;7.71e-08;25!UBERON:0000922;9.42e-08;49!UBERON:0001016;1.21e-07;83!UBERON:0000955;2.14e-07;68!UBERON:0001017;4.75e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.40e-26,114;UBERON:0001016,1.40e-17,89;UBERON:0001017,6.76e-16,81;UBERON:0001049,3.42e-15,56;UBERON:0005068,3.42e-15,56;UBERON:0006241,3.42e-15,56;UBERON:0007135,3.42e-15,56;UBERON:0000073,1.30e-14,53;UBERON:0002616,1.30e-14,53;UBERON:0000955,3.32e-14,68;UBERON:0006238,3.32e-14,68;UBERON:0002780,1.05e-13,41;UBERON:0001890,1.05e-13,41;UBERON:0003080,1.05e-13,41;UBERON:0006240,1.05e-13,41;UBERON:0002346,2.56e-11,86;UBERON:0003075,3.13e-11,82;UBERON:0007284,3.13e-11,82;UBERON:0001893,6.82e-11,34;UBERON:0003528,1.66e-10,34;UBERON:0002020,1.66e-10,34;UBERON:0001869,3.93e-10,32;UBERON:0002791,4.06e-10,32;UBERON:0003056,8.31e-10,61;UBERON:0002619,1.93e-08,22;UBERON:0001950,4.79e-08,20;UBERON:0000956,8.66e-08,25;UBERON:0000203,8.66e-08,25;UBERON:0004121,3.83e-07,171;UBERON:0000924,3.83e-07,171;UBERON:0006601,3.83e-07,171;UBERON:0011216,3.84e-07,223 | |||
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| ||
|short_description=p2@SIRT1 | |||
}} | }} |
Latest revision as of 22:18, 18 September 2015
Short description: | p2@SIRT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIRT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000212015, NM_012238, uc001jnd.2_5end |
EntrezGene: | SIRT1 |
HGNC: | 14929 |
UniProt: | Q96EB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.00e-09 | 168 |
hematopoietic oligopotent progenitor cell | 6.13e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.13e-09 | 161 |
hematopoietic cell | 5.02e-08 | 177 |
mature alpha-beta T cell | 1.72e-07 | 18 |
alpha-beta T cell | 1.72e-07 | 18 |
immature T cell | 1.72e-07 | 18 |
mature T cell | 1.72e-07 | 18 |
immature alpha-beta T cell | 1.72e-07 | 18 |
hematopoietic lineage restricted progenitor cell | 5.15e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.40e-26 | 114 |
nervous system | 1.40e-17 | 89 |
central nervous system | 6.76e-16 | 81 |
neural tube | 3.42e-15 | 56 |
neural rod | 3.42e-15 | 56 |
future spinal cord | 3.42e-15 | 56 |
neural keel | 3.42e-15 | 56 |
regional part of nervous system | 1.30e-14 | 53 |
regional part of brain | 1.30e-14 | 53 |
brain | 3.32e-14 | 68 |
future brain | 3.32e-14 | 68 |
regional part of forebrain | 1.05e-13 | 41 |
forebrain | 1.05e-13 | 41 |
anterior neural tube | 1.05e-13 | 41 |
future forebrain | 1.05e-13 | 41 |
neurectoderm | 2.56e-11 | 86 |
neural plate | 3.13e-11 | 82 |
presumptive neural plate | 3.13e-11 | 82 |
telencephalon | 6.82e-11 | 34 |
brain grey matter | 1.66e-10 | 34 |
gray matter | 1.66e-10 | 34 |
cerebral hemisphere | 3.93e-10 | 32 |
regional part of telencephalon | 4.06e-10 | 32 |
pre-chordal neural plate | 8.31e-10 | 61 |
regional part of cerebral cortex | 1.93e-08 | 22 |
neocortex | 4.79e-08 | 20 |
cerebral cortex | 8.66e-08 | 25 |
pallium | 8.66e-08 | 25 |
ectoderm-derived structure | 3.83e-07 | 171 |
ectoderm | 3.83e-07 | 171 |
presumptive ectoderm | 3.83e-07 | 171 |
organ system subdivision | 3.84e-07 | 223 |