FFCP PHASE1:Hg19::chr1:178840138..178840143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9068 | |EntrezGene=9068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=489 | |HGNC=489 | ||
|TSSclassifier=strong | |||
|UniProt=O95841 | |UniProt=O95841 | ||
|association_with_transcript=13bp_to_ENST00000367629_5end | |association_with_transcript=13bp_to_ENST00000367629_5end | ||
|cluster_id=chr1:178840138..178840143,- | |||
|coexpression_cluster_id=C3908 | |coexpression_cluster_id=C3908 | ||
|description=CAGE_peak_7_at_ANGPTL1_5end | |description=CAGE_peak_7_at_ANGPTL1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002195;5.75e-21;2!CL:0002571;5.75e-21;2 | |ontology_enrichment_celltype_v019=CL:0002195;5.75e-21;2!CL:0002571;5.75e-21;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002195,4.70e-21,2;CL:0002571,4.70e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.62e-12;1!UBERON:0008801;1.45e-11;1!UBERON:0006242;3.63e-11;1!UBERON:0004874;3.63e-11;1 | |ontology_enrichment_development_v019=UBERON:0000358;8.62e-12;1!UBERON:0008801;1.45e-11;1!UBERON:0006242;3.63e-11;1!UBERON:0004874;3.63e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-23!115;UBERON:0000481!1.16e-10!347;UBERON:0004921!1.95e-07!129;UBERON:0004185!1.95e-07!129;UBERON:0001007!7.77e-07!155;UBERON:0001555!7.77e-07!155;UBERON:0007026!7.77e-07!155 | |ontology_enrichment_uberon=UBERON:0007023!1.03e-23!115;UBERON:0000481!1.16e-10!347;UBERON:0004921!1.95e-07!129;UBERON:0004185!1.95e-07!129;UBERON:0001007!7.77e-07!155;UBERON:0001555!7.77e-07!155;UBERON:0007026!7.77e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;5.75e-21;2!UBERON:0001723;1.41e-14;3!UBERON:0001033;1.41e-14;3!UBERON:0007029;9.56e-12;1!UBERON:0001831;1.45e-11;1!UBERON:0001567;1.45e-11;1!UBERON:0000989;3.63e-11;1!UBERON:0008811;3.63e-11;1!UBERON:0002108;5.94e-09;4!UBERON:0000974;1.33e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000341;5.75e-21;2!UBERON:0001723;1.41e-14;3!UBERON:0001033;1.41e-14;3!UBERON:0007029;9.56e-12;1!UBERON:0001831;1.45e-11;1!UBERON:0001567;1.45e-11;1!UBERON:0000989;3.63e-11;1!UBERON:0008811;3.63e-11;1!UBERON:0002108;5.94e-09;4!UBERON:0000974;1.33e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,6.37e-21,2;UBERON:0001723,1.00e-14,3;UBERON:0001033,1.00e-14,3;UBERON:0010056,1.00e-14,3;UBERON:0007029,9.57e-12,1;UBERON:0001831,1.78e-11,1;UBERON:0001567,1.78e-11,1;UBERON:0008801,1.78e-11,1;UBERON:0000989,2.18e-11,1;UBERON:0008811,2.18e-11,1;UBERON:0006258,2.18e-11,1;UBERON:0005876,2.18e-11,1;UBERON:0004874,2.18e-11,1;UBERON:0002108,7.26e-09,4;UBERON:0001007,5.30e-08,145;UBERON:0001555,5.30e-08,145;UBERON:0007026,5.30e-08,145;UBERON:0004119,4.41e-07,160;UBERON:0000925,4.41e-07,160;UBERON:0006595,4.41e-07,160;UBERON:0004921,5.61e-07,118 | |||
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| ||
|short_description=p7@ANGPTL1 | |short_description=p7@ANGPTL1 | ||
}} | }} |
Latest revision as of 21:54, 18 September 2015
Short description: | p7@ANGPTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ANGPTL1_5end |
Coexpression cluster: | C3908_tongue_skin_trachea_thyroid_throat_umbilical_epididymis |
Association with transcript: | 13bp_to_ENST00000367629_5end |
EntrezGene: | ANGPTL1 |
HGNC: | 489 |
UniProt: | O95841 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 4.70e-21 | 2 |
hepatic mesenchymal stem cell | 4.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
throat | 6.37e-21 | 2 |
tongue | 1.00e-14 | 3 |
gustatory system | 1.00e-14 | 3 |
future tongue | 1.00e-14 | 3 |
surface | 9.57e-12 | 1 |
parotid gland | 1.78e-11 | 1 |
cheek | 1.78e-11 | 1 |
parotid gland primordium | 1.78e-11 | 1 |
penis | 2.18e-11 | 1 |
intromittent organ | 2.18e-11 | 1 |
lateral plate mesenchyme | 2.18e-11 | 1 |
undifferentiated genital tubercle | 2.18e-11 | 1 |
somatopleure | 2.18e-11 | 1 |
small intestine | 7.26e-09 | 4 |
digestive system | 5.30e-08 | 145 |
digestive tract | 5.30e-08 | 145 |
primitive gut | 5.30e-08 | 145 |
endoderm-derived structure | 4.41e-07 | 160 |
endoderm | 4.41e-07 | 160 |
presumptive endoderm | 4.41e-07 | 160 |
subdivision of digestive tract | 5.61e-07 | 118 |