FFCP PHASE1:Hg19::chr17:17494948..17494966,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10400 | |EntrezGene=10400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |HGNC=8830 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBG1 | |UniProt=C9JBG1 | ||
|association_with_transcript=0bp_to_ENST00000421096_5end | |association_with_transcript=0bp_to_ENST00000421096_5end | ||
|cluster_id=chr17:17494948..17494966,- | |||
|coexpression_cluster_id=C3610 | |coexpression_cluster_id=C3610 | ||
|description=CAGE_peak_3_at_PEMT_5end | |description=CAGE_peak_3_at_PEMT_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.31e-18!180;CL:0000183!2.70e-08!59;CL:0000325!2.72e-08!39;CL:0002321!9.36e-08!248;CL:0000066!1.71e-07!254;CL:0000220!2.01e-07!246;CL:0000057!5.90e-07!75;CL:0000680!6.43e-07!57;CL:0000056!6.43e-07!57;CL:0000355!6.43e-07!57;CL:0000136!7.81e-07!15;CL:0000187!9.66e-07!54 | |ontology_enrichment_celltype=CL:0000055!3.31e-18!180;CL:0000183!2.70e-08!59;CL:0000325!2.72e-08!39;CL:0002321!9.36e-08!248;CL:0000066!1.71e-07!254;CL:0000220!2.01e-07!246;CL:0000057!5.90e-07!75;CL:0000680!6.43e-07!57;CL:0000056!6.43e-07!57;CL:0000355!6.43e-07!57;CL:0000136!7.81e-07!15;CL:0000187!9.66e-07!54 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.87e-07,58;CL:0000056,3.87e-07,58;CL:0000355,3.87e-07,58;CL:0000136,5.08e-07,15;CL:0000187,5.91e-07,55;CL:0000393,9.23e-07,61;CL:0000211,9.23e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.53e-16!365;UBERON:0000481!2.10e-10!347;UBERON:0000119!2.77e-10!312;UBERON:0000483!5.04e-10!309;UBERON:0000477!4.11e-08!286;UBERON:0000468!9.73e-08!659;UBERON:0000064!1.41e-07!219 | |ontology_enrichment_uberon=UBERON:0000475!9.53e-16!365;UBERON:0000481!2.10e-10!347;UBERON:0000119!2.77e-10!312;UBERON:0000483!5.04e-10!309;UBERON:0000477!4.11e-08!286;UBERON:0000468!9.73e-08!659;UBERON:0000064!1.41e-07!219 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.05e-09,309;UBERON:0000483,7.19e-09,306;UBERON:0007503,2.99e-07,78 | |||
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| ||
|short_description=p3@PEMT | |short_description=p3@PEMT | ||
}} | }} |
Latest revision as of 21:47, 18 September 2015
Short description: | p3@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PEMT_5end |
Coexpression cluster: | C3610_osteosarcoma_Mesenchymal_Renal_thyroid_Adipocyte_Fibroblast_Melanocyte |
Association with transcript: | 0bp_to_ENST00000421096_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | C9JBG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.87e-07 | 58 |
myoblast | 3.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.87e-07 | 58 |
fat cell | 5.08e-07 | 15 |
muscle cell | 5.91e-07 | 55 |
electrically responsive cell | 9.23e-07 | 61 |
electrically active cell | 9.23e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cell layer | 4.05e-09 | 309 |
epithelium | 7.19e-09 | 306 |
epithelial vesicle | 2.99e-07 | 78 |