FFCP PHASE1:Hg19::chr12:52579508..52579522,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144501 | |EntrezGene=144501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27056 | |HGNC=27056 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000466011,uc001rzw.2_5end | |association_with_transcript=10bp_to_ENST00000466011,uc001rzw.2_5end | ||
|cluster_id=chr12:52579508..52579522,- | |||
|coexpression_cluster_id=C2214 | |||
|description=CAGE_peak_7_at_KRT80_5end | |description=CAGE_peak_7_at_KRT80_5end | ||
|id=chr12:52579508..52579522,- | |id=chr12:52579508..52579522,- | ||
|ontology_enrichment_celltype=CL:0000066!2.39e-13!254;CL:0002586!8.58e-11!3;CL:0002150!1.34e-10!3;CL:0000861!1.34e-10!3;CL:0000149!3.53e-08!4 | |ontology_enrichment_celltype=CL:0000066!2.39e-13!254;CL:0002586!8.58e-11!3;CL:0002150!1.34e-10!3;CL:0000861!1.34e-10!3;CL:0000149!3.53e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.00e-16;3!CL:0000149;8.66e-13;4!CL:0001014;2.50e-07;2!CL:0001016;2.50e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.90e-17,3;CL:0000149,7.26e-13,4;CL:0001014,2.58e-07,2;CL:0001016,2.58e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;3.18e-07;2!DOID:4905;3.18e-07;2!DOID:3498;3.18e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,3.28e-07,2;DOID:4905,3.28e-07,2;DOID:3498,3.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.58e-20!9;UBERON:0001781!8.58e-11!3;UBERON:0001782!8.58e-11!3;UBERON:0005424!8.58e-11!3;UBERON:0001557!5.44e-09!19;UBERON:0005910!4.88e-08!6;UBERON:0007625!4.29e-07!11;UBERON:0006554!6.37e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.00e-16;3!UBERON:0001782;1.00e-16;3!UBERON:0007029;7.68e-13;1!UBERON:0001000;7.68e-13;1!UBERON:0005352;7.68e-13;1!UBERON:0000966;2.04e-10;5!UBERON:0005388;2.04e-10;5!UBERON:0001802;2.04e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,7.90e-17,3;UBERON:0005424,7.90e-17,3;UBERON:0007029,6.82e-13,1;UBERON:0001781,7.26e-13,4;UBERON:0001000,7.68e-13,1;UBERON:0005352,7.68e-13,1;UBERON:0000966,7.05e-09,6;UBERON:0005388,7.05e-09,6;UBERON:0001802,7.05e-09,6 | |||
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| ||
|short_description=p7@KRT80 | |short_description=p7@KRT80 | ||
}} | }} |
Latest revision as of 21:45, 18 September 2015
Short description: | p7@KRT80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KRT80_5end |
Coexpression cluster: | C2214_Retinal_mesothelioma_anaplastic_glioblastoma_immature_ductal_cervical |
Association with transcript: | 10bp_to_ENST00000466011, uc001rzw.2_5end |
EntrezGene: | KRT80 |
HGNC: | 27056 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.90e-17 | 3 |
visual pigment cell | 7.26e-13 | 4 |
CD1a-positive Langerhans cell | 2.58e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 7.90e-17 | 3 |
presumptive retinal pigmented epithelium | 7.90e-17 | 3 |
surface | 6.82e-13 | 1 |
layer of retina | 7.26e-13 | 4 |
vas deferens | 7.68e-13 | 1 |
spermatic cord | 7.68e-13 | 1 |
retina | 7.05e-09 | 6 |
photoreceptor array | 7.05e-09 | 6 |
posterior segment of eyeball | 7.05e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 3.28e-07 | 2 |
pancreatic carcinoma | 3.28e-07 | 2 |
pancreatic ductal adenocarcinoma | 3.28e-07 | 2 |