FFCP PHASE1:Hg19::chr12:52579466..52579477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144501 | |EntrezGene=144501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27056 | |HGNC=27056 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000466011_5end | |association_with_transcript=55bp_to_ENST00000466011_5end | ||
|cluster_id=chr12:52579466..52579477,- | |||
|coexpression_cluster_id=C2214 | |||
|description=CAGE_peak_12_at_KRT80_5end | |description=CAGE_peak_12_at_KRT80_5end | ||
|id=chr12:52579466..52579477,- | |id=chr12:52579466..52579477,- | ||
|ontology_enrichment_celltype=CL:0002586!2.73e-12!3;CL:0000066!3.06e-12!254;CL:0002150!6.87e-12!3;CL:0000861!6.87e-12!3;CL:0000076!1.90e-09!62;CL:0000149!2.58e-09!4;CL:0000317!1.67e-08!2;CL:1000448!1.67e-08!2;CL:0002308!1.67e-08!2;CL:0002140!1.67e-08!2;CL:0000077!2.28e-08!19;CL:0000362!3.25e-07!8 | |ontology_enrichment_celltype=CL:0002586!2.73e-12!3;CL:0000066!3.06e-12!254;CL:0002150!6.87e-12!3;CL:0000861!6.87e-12!3;CL:0000076!1.90e-09!62;CL:0000149!2.58e-09!4;CL:0000317!1.67e-08!2;CL:1000448!1.67e-08!2;CL:0002308!1.67e-08!2;CL:0002140!1.67e-08!2;CL:0000077!2.28e-08!19;CL:0000362!3.25e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002586;3.89e-23;3!CL:0000149;1.27e-17;4!CL:0001014;1.44e-09;2!CL:0001016;1.44e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.15e-23,3;CL:0000149,1.57e-17,4;CL:0001014,1.03e-09,2;CL:0001016,1.03e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.39e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4074;1.44e-09;2!DOID:4905;1.44e-09;2!DOID:3498;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.44e-09,2;DOID:4905,1.44e-09,2;DOID:3498,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.21e-18!9;UBERON:0001557!3.83e-13!19;UBERON:0001781!2.73e-12!3;UBERON:0001782!2.73e-12!3;UBERON:0005424!2.73e-12!3;UBERON:0002419!1.67e-08!2;UBERON:0007771!1.67e-08!2;UBERON:0003297!1.67e-08!2;UBERON:0001821!1.67e-08!2;UBERON:0003487!1.67e-08!2;UBERON:0001820!1.67e-08!2;UBERON:0005089!1.67e-08!2;UBERON:0005088!1.67e-08!2;UBERON:0000966!1.60e-07!5;UBERON:0005388!1.60e-07!5;UBERON:0001802!1.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;3.89e-23;3!UBERON:0001782;3.89e-23;3!UBERON:0007029;8.72e-18;1!UBERON:0000966;2.66e-14;5!UBERON:0005388;2.66e-14;5!UBERON:0001802;2.66e-14;5!UBERON:0007625;5.39e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.15e-23,3;UBERON:0005424,5.15e-23,3;UBERON:0007029,7.37e-18,1;UBERON:0001781,1.57e-17,4;UBERON:0000966,5.08e-12,6;UBERON:0005388,5.08e-12,6;UBERON:0001802,5.08e-12,6;UBERON:0007625,5.81e-07,11 | |||
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| ||
|short_description=p12@KRT80 | |short_description=p12@KRT80 | ||
}} | }} |
Latest revision as of 21:44, 18 September 2015
Short description: | p12@KRT80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KRT80_5end |
Coexpression cluster: | C2214_Retinal_mesothelioma_anaplastic_glioblastoma_immature_ductal_cervical |
Association with transcript: | 55bp_to_ENST00000466011_5end |
EntrezGene: | KRT80 |
HGNC: | 27056 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.15e-23 | 3 |
visual pigment cell | 1.57e-17 | 4 |
CD1a-positive Langerhans cell | 1.03e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.03e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 5.15e-23 | 3 |
presumptive retinal pigmented epithelium | 5.15e-23 | 3 |
surface | 7.37e-18 | 1 |
layer of retina | 1.57e-17 | 4 |
retina | 5.08e-12 | 6 |
photoreceptor array | 5.08e-12 | 6 |
posterior segment of eyeball | 5.08e-12 | 6 |
pigment epithelium of eye | 5.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.44e-09 | 2 |
pancreatic carcinoma | 1.44e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.44e-09 | 2 |