FFCP PHASE1:Hg19::chr6:43139041..43139094,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6722 | |EntrezGene=6722 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11291 | |HGNC=11291 | ||
|TSSclassifier=strong | |||
|UniProt=P11831 | |UniProt=P11831 | ||
|association_with_transcript=4bp_to_ENST00000265354_5end | |association_with_transcript=4bp_to_ENST00000265354_5end | ||
|cluster_id=chr6:43139041..43139094,+ | |||
|description=CAGE_peak_3_at_SRF_5end | |description=CAGE_peak_3_at_SRF_5end | ||
|id=chr6:43139041..43139094,+ | |id=chr6:43139041..43139094,+ | ||
|ontology_enrichment_celltype=CL:0000393!1.56e-08!60;CL:0000211!1.56e-08!60;CL:0000183!1.42e-07!59 | |ontology_enrichment_celltype=CL:0000393!1.56e-08!60;CL:0000211!1.56e-08!60;CL:0000183!1.42e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.09e-08,61;CL:0000211,1.09e-08,61;CL:0000187,7.95e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.07e-09!659;UBERON:0000922!1.22e-08!612;UBERON:0000481!2.94e-08!347;UBERON:0002050!7.07e-08!605;UBERON:0005423!7.07e-08!605;UBERON:0003104!1.21e-07!238;UBERON:0009142!1.21e-07!238;UBERON:0000923!1.35e-07!604;UBERON:0005291!1.35e-07!604;UBERON:0006598!1.35e-07!604;UBERON:0002532!1.35e-07!604;UBERON:0000467!2.48e-07!625;UBERON:0000480!2.92e-07!626;UBERON:0005256!3.11e-07!143;UBERON:0002385!7.96e-07!63;UBERON:0001015!7.96e-07!63;UBERON:0000383!7.96e-07!63 | |ontology_enrichment_uberon=UBERON:0000468!4.07e-09!659;UBERON:0000922!1.22e-08!612;UBERON:0000481!2.94e-08!347;UBERON:0002050!7.07e-08!605;UBERON:0005423!7.07e-08!605;UBERON:0003104!1.21e-07!238;UBERON:0009142!1.21e-07!238;UBERON:0000923!1.35e-07!604;UBERON:0005291!1.35e-07!604;UBERON:0006598!1.35e-07!604;UBERON:0002532!1.35e-07!604;UBERON:0000467!2.48e-07!625;UBERON:0000480!2.92e-07!626;UBERON:0005256!3.11e-07!143;UBERON:0002385!7.96e-07!63;UBERON:0001015!7.96e-07!63;UBERON:0000383!7.96e-07!63 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.79e-09,592;UBERON:0000923,1.47e-08,560;UBERON:0010316,1.47e-08,560;UBERON:0005291,1.47e-08,560;UBERON:0006598,1.47e-08,560;UBERON:0010317,1.47e-08,560;UBERON:0002532,1.47e-08,560;UBERON:0005423,1.56e-08,581;UBERON:0005256,2.58e-08,122;UBERON:0007503,3.44e-08,78;UBERON:0002050,3.70e-08,564;UBERON:0003104,2.01e-07,160;UBERON:0009142,2.01e-07,160;UBERON:0002385,5.66e-07,64;UBERON:0001015,5.66e-07,64;UBERON:0000383,5.66e-07,64;UBERON:0000479,9.16e-07,773 | |||
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| ||
|short_description=p3@SRF | |short_description=p3@SRF | ||
}} | }} |
Latest revision as of 21:36, 18 September 2015
Short description: | p3@SRF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRF_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000265354_5end |
EntrezGene: | SRF |
HGNC: | 11291 |
UniProt: | P11831 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.09e-08 | 61 |
electrically active cell | 1.09e-08 | 61 |
muscle cell | 7.95e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
embryo | 4.79e-09 | 592 |
germ layer | 1.47e-08 | 560 |
germ layer / neural crest | 1.47e-08 | 560 |
embryonic tissue | 1.47e-08 | 560 |
presumptive structure | 1.47e-08 | 560 |
germ layer / neural crest derived structure | 1.47e-08 | 560 |
epiblast (generic) | 1.47e-08 | 560 |
developing anatomical structure | 1.56e-08 | 581 |
trunk mesenchyme | 2.58e-08 | 122 |
epithelial vesicle | 3.44e-08 | 78 |
embryonic structure | 3.70e-08 | 564 |
mesenchyme | 2.01e-07 | 160 |
entire embryonic mesenchyme | 2.01e-07 | 160 |
muscle tissue | 5.66e-07 | 64 |
musculature | 5.66e-07 | 64 |
musculature of body | 5.66e-07 | 64 |
tissue | 9.16e-07 | 773 |