FFCP PHASE1:Hg19::chr7:47988099..47988115,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=168507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18053 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TDX9 | |||
|association_with_transcript=-11bp_to_ENST00000289672_5end | |||
|cluster_id=chr7:47988099..47988115,- | |||
|coexpression_cluster_id=C1679 | |||
|description=CAGE_peak_2_at_PKD1L1_5end | |||
|id=chr7:47988099..47988115,- | |||
|ontology_enrichment_celltype=CL:0002139!8.01e-32!24;CL:0000115!1.20e-28!35;CL:0000071!3.78e-22!18;CL:0002546!3.78e-22!18;CL:0002078!1.58e-21!44;CL:1000413!9.83e-18!9;CL:0000213!2.91e-15!57;CL:0000215!2.91e-15!57;CL:0005020!2.11e-11!6;CL:0002138!2.11e-11!6;CL:0005022!2.11e-11!6;CL:0002544!4.83e-11!6;CL:0002618!7.18e-09!3;CL:0002543!1.52e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;9.11e-20;6!CL:0002543;5.26e-19;6!CL:0002139;1.90e-18;24!CL:0002618;2.49e-17;3!CL:0000115;5.52e-17;36!CL:0002078;2.17e-11;45!CL:0000213;1.79e-08;58!CL:0000215;1.79e-08;58!CL:0002262;1.09e-07;2!CL:1000398;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.09e-21,36;CL:0005020,1.04e-19,6;CL:0002138,1.04e-19,6;CL:0005022,1.04e-19,6;CL:0002543,7.17e-19,6;CL:0002139,2.36e-18,24;CL:0002618,2.95e-17,3;CL:0002078,5.60e-17,45;CL:0000213,5.34e-13,58;CL:0000215,5.34e-13,58;CL:0002262,9.87e-08,2;CL:1000398,9.87e-08,2 | |||
|ontology_enrichment_development_v019=CL:0005022;9.11e-20;6!UBERON:0010227;6.23e-14;1!UBERON:0005062;1.77e-13;4!UBERON:0007284;1.77e-13;4!UBERON:0008814;1.87e-07;2!UBERON:0010056;1.87e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.78e-22!18;UBERON:0004638!3.78e-22!18;UBERON:0004852!3.78e-22!18;UBERON:0003915!9.83e-18!9;UBERON:0004700!9.83e-18!9;UBERON:0001917!9.83e-18!9;UBERON:0000487!1.67e-17!22;UBERON:0006914!5.29e-15!25;UBERON:0000055!2.26e-14!69;UBERON:0007023!1.77e-13!115;UBERON:0002049!9.10e-12!79;UBERON:0007798!9.10e-12!79;UBERON:0001009!5.52e-11!113;UBERON:0001981!8.64e-10!60;UBERON:0007500!8.64e-10!60;UBERON:0004537!8.64e-10!60;UBERON:0006965!8.64e-10!60;UBERON:0004535!1.74e-09!110;UBERON:0004111!2.51e-09!241;UBERON:0003978!3.51e-09!3;UBERON:0009751!3.51e-09!3;UBERON:0000946!3.51e-09!3;UBERON:0002523!3.51e-09!3;UBERON:0005983!3.51e-09!3;UBERON:0002165!3.51e-09!3;UBERON:0002062!3.51e-09!3;UBERON:0007280!3.51e-09!3;UBERON:0002465!3.74e-09!10;UBERON:0004151!6.81e-09!3;UBERON:0004872!1.58e-08!84;UBERON:0001473!1.98e-08!8;UBERON:0004536!1.98e-08!8;UBERON:0006558!1.98e-08!8;UBERON:0000477!8.13e-08!286;UBERON:0003103!6.01e-07!69;UBERON:0003914!8.84e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.23e-17;3!UBERON:0000946;1.23e-17;3!UBERON:0001723;2.49e-17;3!UBERON:0001033;2.49e-17;3!UBERON:0001473;5.49e-15;8!UBERON:0004536;5.49e-15;8!UBERON:0006558;5.49e-15;8!UBERON:0002135;4.25e-14;1!UBERON:0002079;6.23e-14;1!UBERON:0002146;1.25e-13;1!UBERON:0002171;1.25e-13;1!UBERON:0005623;1.25e-13;1!UBERON:0006518;1.25e-13;1!UBERON:0008949;1.25e-13;1!UBERON:0000101;1.25e-13;1!UBERON:0002167;1.25e-13;1!UBERON:0001638;6.93e-13;9!UBERON:0003920;6.93e-13;9!UBERON:0004582;6.93e-13;9!UBERON:0002465;4.15e-12;10!UBERON:0002066;8.71e-11;5!UBERON:0001281;1.09e-07;2!UBERON:0003497;1.09e-07;2!UBERON:0003909;1.09e-07;2!UBERON:0002133;1.09e-07;2!UBERON:0003835;1.09e-07;2!UBERON:0002081;1.32e-07;2!UBERON:0000341;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.08e-17,3;UBERON:0009751,1.08e-17,3;UBERON:0000946,1.08e-17,3;UBERON:0002523,1.08e-17,3;UBERON:0005983,1.08e-17,3;UBERON:0002165,1.08e-17,3;UBERON:0002062,1.08e-17,3;UBERON:0007280,1.08e-17,3;UBERON:0001723,1.39e-17,3;UBERON:0001033,1.39e-17,3;UBERON:0010056,1.39e-17,3;UBERON:0001473,6.04e-15,8;UBERON:0004536,6.04e-15,8;UBERON:0006558,6.04e-15,8;UBERON:0002135,3.98e-14,1;UBERON:0002079,6.65e-14,1;UBERON:0000055,7.03e-14,68;UBERON:0002171,9.73e-14,1;UBERON:0006518,9.73e-14,1;UBERON:0008949,9.73e-14,1;UBERON:0000101,9.73e-14,1;UBERON:0002167,9.73e-14,1;UBERON:0002146,1.10e-13,1;UBERON:0005623,1.10e-13,1;UBERON:0001638,8.50e-13,9;UBERON:0003920,8.50e-13,9;UBERON:0004582,8.50e-13,9;UBERON:0002465,4.47e-12,10;UBERON:0002049,5.70e-12,78;UBERON:0007798,5.70e-12,78;UBERON:0002066,9.62e-11,5;UBERON:0004535,2.87e-10,109;UBERON:0001009,5.85e-10,112;UBERON:0004111,1.95e-08,240;UBERON:0004797,4.12e-08,7;UBERON:0001281,9.87e-08,2;UBERON:0003497,9.87e-08,2;UBERON:0003909,9.87e-08,2;UBERON:0003835,9.87e-08,2;UBERON:0002133,1.05e-07,2;UBERON:0002081,1.36e-07,2;UBERON:0010227,1.36e-07,2;UBERON:0000341,2.40e-07,2;UBERON:0007500,3.07e-07,59;UBERON:0001981,3.07e-07,59;UBERON:0004537,3.07e-07,59;UBERON:0006965,3.07e-07,59;UBERON:0004872,9.59e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.825354125820202,0.626984899610432,3.10100111003195,9.96145535522789,3.01248551488203,0.402829317109147,0,0,0.735326160691737,0.81014194788176,1.3394959242612,1.12264686313085,0.337834441449967,0,0,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,1.32969058292435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,2.27466768141793,0.850468526382578,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,3.35138881526705,1.3749625440701,0.717873024576814,0,0.858452096273142,0.446342914883745,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,1.65695622138878,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,1.0661699095049,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,1.74173398317569,1.71116650542641,0.202056159043763,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p2@PKD1L1 | |||
}} |
Latest revision as of 21:36, 18 September 2015
Short description: | p2@PKD1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKD1L1_5end |
Coexpression cluster: | C1679_Endothelial_retina_Hepatic_lung_Renal_kidney_gall |
Association with transcript: | -11bp_to_ENST00000289672_5end |
EntrezGene: | PKD1L1 |
HGNC: | 18053 |
UniProt: | Q8TDX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.09e-21 | 36 |
lymphangioblast | 1.04e-19 | 6 |
endothelial cell of lymphatic vessel | 1.04e-19 | 6 |
vascular lymphangioblast | 1.04e-19 | 6 |
vein endothelial cell | 7.17e-19 | 6 |
endothelial cell of vascular tree | 2.36e-18 | 24 |
endothelial cell of umbilical vein | 2.95e-17 | 3 |
meso-epithelial cell | 5.60e-17 | 45 |
lining cell | 5.34e-13 | 58 |
barrier cell | 5.34e-13 | 58 |
endothelial cell of sinusoid | 9.87e-08 | 2 |
endothelial cell of hepatic sinusoid | 9.87e-08 | 2 |