FFCP PHASE1:Hg19::chr2:89157161..89157206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5716 | |HGNC=5716 | ||
|TSSclassifier=strong | |||
|UniProt=P01834 | |UniProt=P01834 | ||
|association_with_transcript=0bp_to_ENST00000390237_5end | |association_with_transcript=0bp_to_ENST00000390237_5end | ||
|cluster_id=chr2:89157161..89157206,- | |||
|coexpression_cluster_id=C668 | |coexpression_cluster_id=C668 | ||
|description=CAGE_peak_1_at_IGKC_5end | |description=CAGE_peak_1_at_IGKC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!3.13e-27!14;CL:0000945!9.45e-25!24;CL:0000826!9.45e-25!24;CL:0000838!1.73e-12!52;CL:0000542!3.77e-12!53;CL:0000051!3.77e-12!53;CL:0002087!4.26e-07!119;CL:0000784!9.05e-07!3 | |ontology_enrichment_celltype=CL:0000236!3.13e-27!14;CL:0000945!9.45e-25!24;CL:0000826!9.45e-25!24;CL:0000838!1.73e-12!52;CL:0000542!3.77e-12!53;CL:0000051!3.77e-12!53;CL:0002087!4.26e-07!119;CL:0000784!9.05e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.73e-34;13!CL:0000945;6.26e-31;24!CL:0000542;1.51e-10;53 | |ontology_enrichment_celltype_v019=CL:0000236;2.73e-34;13!CL:0000945;6.26e-31;24!CL:0000542;1.51e-10;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.61e-37,14;CL:0000945,5.89e-31,24;CL:0000826,5.89e-31,24;CL:0000838,1.16e-13,52;CL:0000542,2.52e-13,53;CL:0000051,2.52e-13,53;CL:0002087,1.66e-07,115;CL:0000785,1.77e-07,2;CL:0000955,1.77e-07,2;CL:0000818,1.77e-07,2;CL:0000954,1.77e-07,2;CL:0000816,1.77e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.51e-10;53!UBERON:0004872;1.81e-07;7!UBERON:0006965;1.86e-07;2!CL:0000954;1.89e-07;2 | |ontology_enrichment_development_v019=CL:0000051;1.51e-10;53!UBERON:0004872;1.81e-07;7!UBERON:0006965;1.86e-07;2!CL:0000954;1.89e-07;2 | ||
|ontology_enrichment_disease=DOID:0060058!2.91e-07!10 | |ontology_enrichment_disease=DOID:0060058!2.91e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-43!115;UBERON:0000178!5.63e-12!15;UBERON:0000179!5.63e-12!15;UBERON:0000463!5.63e-12!15 | |ontology_enrichment_uberon=UBERON:0007023!1.70e-43!115;UBERON:0000178!5.63e-12!15;UBERON:0000179!5.63e-12!15;UBERON:0000463!5.63e-12!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.46e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001829;1.46e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.14e-28,114;UBERON:0001829,1.46e-07,2 | |||
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| ||
|short_description=p1@IGKC | |short_description=p1@IGKC | ||
}} | }} |
Latest revision as of 21:22, 18 September 2015
Short description: | p1@IGKC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGKC_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 0bp_to_ENST00000390237_5end |
EntrezGene: | NA |
HGNC: | 5716 |
UniProt: | P01834 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.61e-37 | 14 |
lymphocyte of B lineage | 5.89e-31 | 24 |
pro-B cell | 5.89e-31 | 24 |
lymphoid lineage restricted progenitor cell | 1.16e-13 | 52 |
lymphocyte | 2.52e-13 | 53 |
common lymphoid progenitor | 2.52e-13 | 53 |
nongranular leukocyte | 1.66e-07 | 115 |
mature B cell | 1.77e-07 | 2 |
pre-B-II cell | 1.77e-07 | 2 |
transitional stage B cell | 1.77e-07 | 2 |
small pre-B-II cell | 1.77e-07 | 2 |
immature B cell | 1.77e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.14e-28 | 114 |
major salivary gland | 1.46e-07 | 2 |