FFCP PHASE1:Hg19::chr18:13611909..13611923,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=753 | |EntrezGene=753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1224 | |HGNC=1224 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_uc002ksg.1_5end | |association_with_transcript=65bp_to_uc002ksg.1_5end | ||
|cluster_id=chr18:13611909..13611923,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_10_at_C18orf1_5end | |description=CAGE_peak_10_at_C18orf1_5end | ||
|id=chr18:13611909..13611923,+ | |id=chr18:13611909..13611923,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.41e-35!42;CL:0000860!7.46e-32!45;CL:0000557!4.61e-27!71;CL:0002009!2.22e-25!65;CL:0002194!1.10e-22!63;CL:0000576!1.10e-22!63;CL:0000040!1.10e-22!63;CL:0000559!1.10e-22!63;CL:0000839!3.90e-22!70;CL:0000766!4.18e-21!76;CL:0000763!9.60e-21!112;CL:0000049!9.60e-21!112;CL:0000037!9.08e-19!172;CL:0000566!9.08e-19!172;CL:0000988!8.04e-18!182;CL:0000738!1.81e-17!140;CL:0002031!6.60e-15!124;CL:0002032!1.79e-14!165;CL:0000837!1.79e-14!165;CL:0002087!6.23e-14!119 | |ontology_enrichment_celltype=CL:0002057!7.41e-35!42;CL:0000860!7.46e-32!45;CL:0000557!4.61e-27!71;CL:0002009!2.22e-25!65;CL:0002194!1.10e-22!63;CL:0000576!1.10e-22!63;CL:0000040!1.10e-22!63;CL:0000559!1.10e-22!63;CL:0000839!3.90e-22!70;CL:0000766!4.18e-21!76;CL:0000763!9.60e-21!112;CL:0000049!9.60e-21!112;CL:0000037!9.08e-19!172;CL:0000566!9.08e-19!172;CL:0000988!8.04e-18!182;CL:0000738!1.81e-17!140;CL:0002031!6.60e-15!124;CL:0002032!1.79e-14!165;CL:0000837!1.79e-14!165;CL:0002087!6.23e-14!119 | ||
|ontology_enrichment_celltype_v019=CL:0001014;8.68e-23;2!CL:0001016;8.68e-23;2!CL:0000860;1.99e-21;33!CL:0002057;1.99e-21;33!CL:0000473;9.73e-16;39!CL:0000234;9.73e-16;39!CL:0002032;9.60e-12;1!CL:0000037;9.60e-12;1!CL:0001024;9.60e-12;1!CL:0000557;9.60e-12;1!CL:0000576;1.47e-11;48!CL:0000453;1.10e-09;5!CL:0000840;3.27e-08;5!CL:0000766;3.73e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,8.70e-23,2;CL:0001016,8.70e-23,2;CL:0000557,2.01e-20,67;CL:0000860,6.67e-19,42;CL:0002057,6.67e-19,42;CL:0002009,6.96e-19,61;CL:0000473,2.11e-16,48;CL:0000234,2.11e-16,48;CL:0000763,2.67e-14,108;CL:0000049,2.67e-14,108;CL:0002194,6.75e-13,59;CL:0000576,6.75e-13,59;CL:0000040,6.75e-13,59;CL:0000559,6.75e-13,59;CL:0000037,9.49e-12,168;CL:0001024,1.07e-11,1;CL:0000839,1.98e-11,66;CL:0000988,4.85e-11,177;CL:0000766,2.14e-10,72;CL:0000453,1.10e-09,5;CL:0000738,2.82e-09,136;CL:0002032,5.59e-09,161;CL:0000837,5.59e-09,161;CL:0002031,6.62e-09,120;CL:0000840,3.27e-08,5;CL:0001029,3.27e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-16;42!UBERON:0005425;3.45e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.02e-24!86;UBERON:0002371!2.23e-24!80;UBERON:0002390!8.29e-24!102;UBERON:0003061!8.29e-24!102;UBERON:0004765!1.77e-21!101;UBERON:0001434!1.77e-21!101;UBERON:0002193!1.66e-20!112;UBERON:0007023!1.08e-17!115;UBERON:0002405!2.68e-17!115;UBERON:0001049!2.09e-16!57;UBERON:0005068!2.09e-16!57;UBERON:0006241!2.09e-16!57;UBERON:0007135!2.09e-16!57;UBERON:0001893!1.19e-13!34;UBERON:0002020!2.56e-13!34;UBERON:0003528!2.56e-13!34;UBERON:0002780!2.57e-13!41;UBERON:0001890!2.57e-13!41;UBERON:0006240!2.57e-13!41;UBERON:0002616!6.50e-13!59;UBERON:0003080!7.19e-13!42;UBERON:0002791!1.55e-12!33;UBERON:0003075!8.13e-12!86;UBERON:0007284!8.13e-12!86;UBERON:0001017!1.34e-11!82;UBERON:0005743!1.60e-11!86;UBERON:0001869!2.15e-11!32;UBERON:0002346!6.36e-11!90;UBERON:0000955!7.59e-11!69;UBERON:0006238!7.59e-11!69;UBERON:0000073!1.18e-10!94;UBERON:0001016!1.18e-10!94;UBERON:0002204!5.80e-09!167;UBERON:0002308!8.76e-09!9;UBERON:0000125!8.76e-09!9;UBERON:0002619!1.51e-08!22;UBERON:0003056!5.06e-08!61;UBERON:0001950!5.31e-08!20;UBERON:0002298!2.83e-07!8;UBERON:0000956!3.06e-07!25;UBERON:0000203!3.06e-07!25;UBERON:0000062!4.07e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;3.71e-22;2!UBERON:0000122;3.71e-22;2!UBERON:0000941;3.45e-12;1!UBERON:0001785;3.45e-12;1!UBERON:0002464;3.45e-12;1!UBERON:0004904;3.45e-12;1!UBERON:0001021;3.45e-12;1!UBERON:0002336;9.60e-12;1!UBERON:0011215;9.60e-12;1!UBERON:0001018;9.60e-12;1!UBERON:0002473;9.60e-12;1!UBERON:0005340;9.60e-12;1!UBERON:0003544;9.60e-12;1!UBERON:0005970;9.60e-12;1!UBERON:0002316;9.60e-12;1!UBERON:0001020;9.60e-12;1!UBERON:0002437;9.60e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.85e-22,2;UBERON:0000122,1.85e-22,2;UBERON:0002371,4.82e-21,76;UBERON:0001474,2.18e-19,82;UBERON:0004765,1.62e-17,90;UBERON:0002405,6.73e-17,93;UBERON:0002390,5.99e-16,98;UBERON:0003061,5.99e-16,98;UBERON:0001434,1.35e-15,100;UBERON:0002193,2.61e-14,108;UBERON:0000941,3.27e-12,1;UBERON:0001785,3.27e-12,1;UBERON:0002464,3.27e-12,1;UBERON:0004904,3.27e-12,1;UBERON:0001021,3.27e-12,1;UBERON:0003902,3.27e-12,1;UBERON:0005425,3.27e-12,1;UBERON:0002336,5.05e-12,1;UBERON:0011215,5.05e-12,1;UBERON:0001018,5.05e-12,1;UBERON:0002473,5.05e-12,1;UBERON:0005340,5.05e-12,1;UBERON:0003544,5.05e-12,1;UBERON:0005970,5.05e-12,1;UBERON:0002316,5.05e-12,1;UBERON:0001020,5.05e-12,1;UBERON:0002437,5.05e-12,1;UBERON:0002204,1.36e-08,167;UBERON:0003714,9.96e-07,2 | |||
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| ||
|short_description=p10@C18orf1 | |short_description=p10@C18orf1 | ||
}} | }} |
Latest revision as of 21:21, 18 September 2015
Short description: | p10@C18orf1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_C18orf1_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 65bp_to_uc002ksg.1_5end |
EntrezGene: | C18orf1 |
HGNC: | 1224 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.70e-23 | 2 |
immature CD1a-positive Langerhans cell | 8.70e-23 | 2 |
granulocyte monocyte progenitor cell | 2.01e-20 | 67 |
classical monocyte | 6.67e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.67e-19 | 42 |
macrophage dendritic cell progenitor | 6.96e-19 | 61 |
defensive cell | 2.11e-16 | 48 |
phagocyte | 2.11e-16 | 48 |
myeloid cell | 2.67e-14 | 108 |
common myeloid progenitor | 2.67e-14 | 108 |
monopoietic cell | 6.75e-13 | 59 |
monocyte | 6.75e-13 | 59 |
monoblast | 6.75e-13 | 59 |
promonocyte | 6.75e-13 | 59 |
hematopoietic stem cell | 9.49e-12 | 168 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.07e-11 | 1 |
myeloid lineage restricted progenitor cell | 1.98e-11 | 66 |
hematopoietic cell | 4.85e-11 | 177 |
myeloid leukocyte | 2.14e-10 | 72 |
Langerhans cell | 1.10e-09 | 5 |
leukocyte | 2.82e-09 | 136 |
hematopoietic oligopotent progenitor cell | 5.59e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.59e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 6.62e-09 | 120 |
immature conventional dendritic cell | 3.27e-08 | 5 |
common dendritic progenitor | 3.27e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 1.85e-22 | 2 |
neuron projection bundle | 1.85e-22 | 2 |
bone marrow | 4.82e-21 | 76 |
bone element | 2.18e-19 | 82 |
skeletal element | 1.62e-17 | 90 |
immune system | 6.73e-17 | 93 |
hematopoietic system | 5.99e-16 | 98 |
blood island | 5.99e-16 | 98 |
skeletal system | 1.35e-15 | 100 |
hemolymphoid system | 2.61e-14 | 108 |
cranial nerve II | 3.27e-12 | 1 |
cranial nerve | 3.27e-12 | 1 |
nerve trunk | 3.27e-12 | 1 |
nerve connecting eye with brain | 3.27e-12 | 1 |
nerve | 3.27e-12 | 1 |
retinal neural layer | 3.27e-12 | 1 |
presumptive neural retina | 3.27e-12 | 1 |
corpus callosum | 5.05e-12 | 1 |
central nervous system cell part cluster | 5.05e-12 | 1 |
axon tract | 5.05e-12 | 1 |
intercerebral commissure | 5.05e-12 | 1 |
dorsal telencephalic commissure | 5.05e-12 | 1 |
brain white matter | 5.05e-12 | 1 |
brain commissure | 5.05e-12 | 1 |
white matter | 5.05e-12 | 1 |
nervous system commissure | 5.05e-12 | 1 |
cerebral hemisphere white matter | 5.05e-12 | 1 |
musculoskeletal system | 1.36e-08 | 167 |
neural tissue | 9.96e-07 | 2 |